Gene Dfer_3669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3669 
Symbol 
ID8227254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4467866 
End bp4468675 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content50% 
IMG OID644931501 
Productformyltetrahydrofolate deformylase 
Protein accessionYP_003088039 
Protein GI255037418 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0788] Formyltetrahydrofolate hydrolase 
TIGRFAM ID[TIGR00655] formyltetrahydrofolate deformylase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0400805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.143987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGCC CCGATCACAA GGGTTTGATC TACCATGTGA CCCGCATTCT TTTTGCCCAT 
AATCAGAATA TCATCAGCAA TGACGAATAT GTGAGCCCTT CGCGCTACTT TTTCATGCGC
ACGGAGTTCG AGGGCGATAC CGATATTCCG CAGTTGCTGC ATGCCCTGCA ATCGGAACTT
CCGCCGGGCC TGAACCTGCG CATTAATCCC AAAAAGAACA AGGATATTGT GCTGATGGTC
ACCAAGGAGC ACCATTGCCT CGGCGAATTG CTGATACGTT ATGCATTCAA CGAGCTCGAC
GCAACCATTC TCGCGGTAGT CAGCAATTAC AATTCGCTGC AACCGCTGGT AGGCAAGTTC
GGGATACCTT TCCATTTTAT TTCCCACGAG AACAAAACCC GTGAGGAGCA TGAGGAGGCG
ATTTTAAGGA CGTTGGAAAT CTACCGCCCC GATTATGTTG TGCTCGCCAA ATACATGCGC
ATTATCACGC CGCAATTCGT CGAACGCTTT CCGAACCGGA TTGTGAACAT CCATCATTCG
TTCCTGCCTG CGTTCATCGG GGCAAACCCT TACCGGCAAG CGTACGAACG CGGAGTGAAG
ATCATTGGTG CCACTGCACA TTTTGTGAAT AATGACCTCG ACGAAGGTCC GATCATAGCG
CAGGACGTCA AGGAAGTCGA CCACAAGCTG ACTGCCGCGG ATATGGCAAC GTTGGGAAAA
GACACGGAGA AGGCGGTGTT GTCGAAGGCA TTGAAACTGG TTTTCAACGA CCGCGTATTC
ATTCATAACA ACCGCACGAT CATTCTGTAA
 
Protein sequence
MDGPDHKGLI YHVTRILFAH NQNIISNDEY VSPSRYFFMR TEFEGDTDIP QLLHALQSEL 
PPGLNLRINP KKNKDIVLMV TKEHHCLGEL LIRYAFNELD ATILAVVSNY NSLQPLVGKF
GIPFHFISHE NKTREEHEEA ILRTLEIYRP DYVVLAKYMR IITPQFVERF PNRIVNIHHS
FLPAFIGANP YRQAYERGVK IIGATAHFVN NDLDEGPIIA QDVKEVDHKL TAADMATLGK
DTEKAVLSKA LKLVFNDRVF IHNNRTIIL