Gene Dfer_3668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3668 
Symbol 
ID8227253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4467209 
End bp4467694 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content56% 
IMG OID644931500 
Productputative GAF sensor protein 
Protein accessionYP_003088038 
Protein GI255037417 
COG category[T] Signal transduction mechanisms 
COG ID[COG1956] GAF domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000365673 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0790972 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAA CATTATTTAT ACCGGCAGAT ACCAACAGAG CGACCGTTTA CGACGCGCTT 
CTGCCGCAAA TAGAAGCATT GGTAGCCGAC GAAAGCGACC TGACGGCCAA TCTGGCCAAC
ATCGCCGCGG TTCTGAAAGA AGCATTCGGC TTTTTCTGGG TCGGATTTTA TTTGGCAAAG
GAAGGGCAGC TCGTGCTCGG GCCGTTTCAG GGGCCGATCG CGTGTACGCG CATACCGTTC
CACAAGGGTG TGTGCGGGGC GAGCTATTCG CGCGCGGAAA CCATCATTGT GCCGGATGTG
GAGCAGTTTC CGGGGCATAT TGCATGCAGT TCGGCGTCGC GTTCGGAGAT CGTCGTGCCG
GTATTTCACC GGAACGGCAC GGTAGCGATG GTGCTGGATG TGGACAGCGA CCAGCTCGAC
GATTTCAGCG AAACAGACCG TGAAGCACTT GAAAAAGTCG CTAAGCTGAT CACGCGCAAG
CTTTGA
 
Protein sequence
MAETLFIPAD TNRATVYDAL LPQIEALVAD ESDLTANLAN IAAVLKEAFG FFWVGFYLAK 
EGQLVLGPFQ GPIACTRIPF HKGVCGASYS RAETIIVPDV EQFPGHIACS SASRSEIVVP
VFHRNGTVAM VLDVDSDQLD DFSETDREAL EKVAKLITRK L