| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3658 |
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| Symbol | |
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| ID | 8227243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4456951 |
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| End bp | 4458420 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644931490 |
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| Product | TonB family protein |
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| Protein accession | YP_003088028 |
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| Protein GI | 255037407 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0517319 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TCTTCCCTCT TTTGATGTTT TTTTGCGCGC CTGTACTTGC CCAGCAGGTG
TATTTGCCGC ATGAAGTAGA AAAGCAGGCC GAGCCGGCAG GAGGATTGGC GGCGCTCAAT
CAGTTTATCA GTACAAACCT CCGAATCCCG TTCGAAACAT CAGTAAAGGG CATTAATGGC
CGGGTTTATC TCAAAGGCGT GGTGCAGCCC GACGGCAGCA TGGGCGACAT AGAGGTGACC
CGCGGGCTGG ATACCCTGTG CAACGCCGAG GCCGTGAAGG TGCTGGGCCT GTACCGCGCC
TGGAAGCCCG CCGTGCTGGG AGGCCAAAAG GTGAGGCAGA CGGTCTTTTT CCCGATAACA
TTCAAGGCGA ATGCCAGGCC AGGCTACGAC GATGCCCGGA AGGCATTTGT TGAATATTTC
AATGAGACAT TCGTGCCTAT TGACTCCGCG CGCGCCAAAT ACCGCCGGAC AACGCCCGTG
GACGAGCGCG GCTTCGTGGC CGGGGACGTG GCCTACGAGG AATCGAAGGG CAAGCGATGG
AAGCGGCTTG GAGAGGCAAA ATTCGCGCGA ACACCGATAC GCTTCAAATC GGGGTTTGTG
AACCCCGTTT CCGATTCGAT TACCGCTTAC CGCATTTCGG CCCGCGATTA CAACGAGGCG
AGCCACGCCA CCGAGGTGAC ATTCGACAAG GATGGCCATA TGCTTTCGTA TGTGGAATAC
GATGTGTTCG GGAAATCGTC GCTGACTAAA AATTACGACC TGAACGGCAT GGTCCGGTAC
CAGCAAATCA TCTCCGATTC TACAACCGTC GAAGTGGCGT GGGACGCCAA CGGACAGATC
AGGAACCACC GCGAAATACA CACTTCGGCA ACGGGAAGTC GTGCGGAACC CTACCTGATG
AACGCCTGGG GGCCGGATGG GACGCAGTAT GTGAAGAACG GAAATGGTTA CTGGCGCGCG
ATTTCGGAAA CGCCCTATGG CCAGCCGCTT TTTGAGCAGG GCAAGGTTGT GAATGGTCTG
AAAGACGGGA AGTGGATCGG CGGCCTAGCC GATAGTGCGC GATATTATGA AGAAGAGTAT
GCCTTGGGCG AGTTCAAAAG CGGCGTGTCG TGGGTGAATG GAGAGAAGGT GGAATATACA
AATCCGATGG TAAGCCCGGT TTTCAAAGGG GGTATTAATG AACTCTACAA GTTTCTGGCG
ATGAACATCC GGTATCCGGC CGAGGCTTCC CGCAGGGGCG TTACCGGCAG GGTAATGCTT
TCTTTTGTGG TGTGCGAAGA TGGTTCAATG TGCGAATACA AGGTCGAAAA CCGGGTAGGC
TTTGGCCTGG ACGAGGAAGC GCTGCGCGTC GTGAAACTCA TGAATGGAAA ATGGTACCCC
GGTACGATGC GGGGGCAGAA AGTAAGGGTG AAATACAATG TCCCGATCAA CTTTCAAATG
GAAACGAGCA GAGCAATGAT ATTCAGGTAG
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| Protein sequence | MKKLFPLLMF FCAPVLAQQV YLPHEVEKQA EPAGGLAALN QFISTNLRIP FETSVKGING
RVYLKGVVQP DGSMGDIEVT RGLDTLCNAE AVKVLGLYRA WKPAVLGGQK VRQTVFFPIT
FKANARPGYD DARKAFVEYF NETFVPIDSA RAKYRRTTPV DERGFVAGDV AYEESKGKRW
KRLGEAKFAR TPIRFKSGFV NPVSDSITAY RISARDYNEA SHATEVTFDK DGHMLSYVEY
DVFGKSSLTK NYDLNGMVRY QQIISDSTTV EVAWDANGQI RNHREIHTSA TGSRAEPYLM
NAWGPDGTQY VKNGNGYWRA ISETPYGQPL FEQGKVVNGL KDGKWIGGLA DSARYYEEEY
ALGEFKSGVS WVNGEKVEYT NPMVSPVFKG GINELYKFLA MNIRYPAEAS RRGVTGRVML
SFVVCEDGSM CEYKVENRVG FGLDEEALRV VKLMNGKWYP GTMRGQKVRV KYNVPINFQM
ETSRAMIFR
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