| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3657 |
|---|
| Symbol | |
|---|
| ID | 8227242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 4455952 |
|---|
| End bp | 4456815 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644931489 |
|---|
| Product | band 7 protein |
|---|
| Protein accession | YP_003088027 |
|---|
| Protein GI | 255037406 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.121464 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAAA AAGAATTACG CTCGATGTCT GGCTATCTGC TGTTTGTGAT TGGCCTGCTG
CTGTTGCTAG GCGGCTTTGT GAATATCGTG TCGTCCGGCC AGGGGCTCAC CAGCGTGCTG
ATTATCGCGG CCGCACTGAT CATTCTGATC GGCCTGACGG TCATTAACCC CAACGAGGGT
GTGGTGACCA CGTTTTTCGG GGATTACATG GGCACCATGA AGCAGAACGG CCTGCGTTGG
GTGAACCCGC TGTTCCGCCG GAAGAAGATC AGCCTCCGCG CCCGTAACCT CAACGGCCAG
AAGCTGAAAG TCAACGACAA GCTCGGAAAC CCGATCGAGA TCGCAGCAGT AGTCGTTTGG
CGCGTGGGTG ACACCGCGAA GGCCTCATTT GAAGTGGATG ATTATGTAAA ATATGTAGAA
ATCCAGTCGG AGGCGGCCGT GCGGCACCTG GCGGGCATTT ATGCTTACGA CACAATGGAA
GATGAGGAGG CAAACATCCA GGAGGTGACT TTGCGCGACG GCAGCGGCAA GATCAACGAA
ATGCTCGAGG CCGAGCTGAC CGAGCGTTTG AGTCGTGCCG GCATCGACGT ACTCGAAGCA
CGGATCAGTC ACCTCGCATA TGCACCCGAG ATCGCCGGCG CGATGCTGCA ACGCCAGCAG
GCCTCAGCGG TGGTGGCGGC CCGCCGACAG ATCGTCAATG GCGCCGTCGG AATGGTGGAC
ATGGCGTTGG CAATGCTGTC GGACAAGCAG ATTGTGGAGC TCGATGAAGA GCGGAAAGCG
GCTATGGTGA GTAATTTGTT GGTAGTTTTG TGCGGTGAGA AAGCGGCGAC CCCAATTCTG
AACGCCGGCA CTTTGTATCC ATAA
|
|---|
| Protein sequence | MIEKELRSMS GYLLFVIGLL LLLGGFVNIV SSGQGLTSVL IIAAALIILI GLTVINPNEG
VVTTFFGDYM GTMKQNGLRW VNPLFRRKKI SLRARNLNGQ KLKVNDKLGN PIEIAAVVVW
RVGDTAKASF EVDDYVKYVE IQSEAAVRHL AGIYAYDTME DEEANIQEVT LRDGSGKINE
MLEAELTERL SRAGIDVLEA RISHLAYAPE IAGAMLQRQQ ASAVVAARRQ IVNGAVGMVD
MALAMLSDKQ IVELDEERKA AMVSNLLVVL CGEKAATPIL NAGTLYP
|
|---|
| |