Gene Dfer_3655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3655 
Symbol 
ID8227240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4453533 
End bp4455713 
Gene Length2181 bp 
Protein Length726 aa 
Translation table11 
GC content52% 
IMG OID644931487 
Productpeptidase S9B dipeptidylpeptidase IV domain protein 
Protein accessionYP_003088025 
Protein GI255037404 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0640869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAA TACTCAGGAC ACTTTCATTA ACAATCCTCT CTTTTCAGCT TTTTGCGCAG 
ATTCCCGACA CATTTCAATG GCTTCCCGAC GGTAGCGGTT TCCGCGATGC CAGCGAAAGC
CAGATCGTAG AAATAACATT GCCCGGCAAT CAGGAAAAAG TAATCGTTTC GGCCGACCAG
CTTACGCCTC AGGGGGGCAA GCCGCTGACG ATCAGAAGTT ATTCTATCAG CAAGGCAGGT
GATAAGGTTT TGGTGTATAC CAATTCAAAA CGCGTGTGGC GTTATGATAC GCGCGGGGAT
TACTGGGTTT ACGACATTGC GGCCAAAACG CTGAAACAGC TCGGAAAAGG CTTGCCCGAA
TCCTCGCTGA TGTTCGCCAA ATTCTCGCCC GACGGTAAAA AAGTAGCGTA TGTGAGCAAG
CATAATGTGT ACGTGGAAGA CCTCGCGGCC AGCACAGTGA AACAGGTTAC TACCGACGGC
ACCGACCGCG TGATTAACGG CACATTCGAC TGGGTTTACG AAGAGGAATT CGACTGCCGC
GACGGCTTCC GGTGGAGCGA CGACAGCAAG TCTATCGCCT ACTGGCAACT CGACGCCCGC
AAAATCCGTA ACTTTTTGAT GATCAACACC ACCGATTCGA TTTACTCGTT TAATGTGCCT
GTTGAATATC CGAAAGTGGG CGAAACGCCG TCCCCGTACA AAATCGGGGT GGTGGATGTA
GCTTCTGCAC AAACGAAGTG GATGAATATT CCCGGCGATC CGCAAAACAC TTATGTTCCG
AGAATGGAGT GGTCGGGAAT GCCGAACGAG CTCGTGATCC AGCAGCTCAA CCGCAAGCAG
AATGAGAGCA CATTGTTTTA CATCAATACC ACTGACGGCA GCGCGAAGCC GTTTTATAGC
GAAAAGGACG AGGCATGGAT AGACATCAAA AGCCGCTGGG ACAATGACCC CGTGGGCTGG
GACTGGATCA ATGGAGGTAA GGAGTTTTTG TGGGTAAGCG AAAAAGACGG CTGGCGCCAC
ACCTACCGCG TAAGTCGCGA CGGCAAGAAG GAAACGCTGA TCACCGTCGG CAATTTTGAC
CTGATCAGCC CCGTGCGCAT CGACGAGAAG AACAATGCCT ATTACTTTAT GGCCTCGCCC
GACAATGCGA CGCAGAGCTA CCTTTACAAA ACCACCCTGG ACGGCAAAGG CACGCTGGTA
CGCATTACGC CCGCCGACCA GGCCGGTTCA CATAACTACG ACATTTCGCC GCTCGCGAAG
TTTGGAAGAC ACCAGTTTTC GAATGCCAAA ACTTCCCCCC TGGTAGAATG GATTTCTTTC
CCAAAACACG TTTCCATCGA CCCGAACAAC TCCATTGCCC AATCAAAGGA TAAAATCAAC
GCGTCTAAAA CGAACATCGA ATTCTTCAAG GTAAAAATTG ACGAGGGAGT GGAAATCGAC
GCGTGGATGG TGAAACCGAC GAATTTTGAT CCTAATAAAA AATACCCGAT CGTTTTTACC
GTATACGGCG AAGCGGCCGG AAGCACCGTG AAGGACGTTT GGGGAACAGG CAAAAACCGC
CTGTACGCAG GCAACATGGC CGACGACGGC TACATTTACG CCTCCATCGA CAACCGGGGC
ACGCCTTCAC CCAAAGGTGC GAAATGGCGC AAGGCGATTT ACCGCAATAT CGGCCGCATC
AACATCAAAG ACATGGACGG AGCCGCTACG GCCATGTTCA GGCAGTTTGC ATTCATCGAT
ACCAGCCGCG TGGCGGTTCA TGGATGGAGC GGAGGCGGCT CGTCGACGCT GAACCTGCTG
TTCCAATATC CGCAGCATTT CAAAACCGGA ATCGCGGTGG CGGCAGTGGC CAACCAGCTT
ACTTACGACA ACATTTACCA GGAGCGCTAT ATGGGCATCC CGCAGGAAAA CCGGGAAGAT
TTCGTGAAAG GTTCGCCTAT CACTCACGCC AAAAACCTGC GTGGTAACCT GCTGTACATC
CACGGTACCG GCGACGACAA TGTGCATTAC CAAAACGCCG AAATGCTCGT AAATGAGCTG
ATCCGTGCCA ATAAGGTGTT CCAATTCATG CCTTATCCCA ACCGCTCGCA CAGCATTTCA
GAAGGGGAAG GAACGATGGT CCACCTGCGC TCACTATTCA CCGATTATTT GAAAAAGAAC
TGCCCTCCGG GAGCGAGATA A
 
Protein sequence
MKQILRTLSL TILSFQLFAQ IPDTFQWLPD GSGFRDASES QIVEITLPGN QEKVIVSADQ 
LTPQGGKPLT IRSYSISKAG DKVLVYTNSK RVWRYDTRGD YWVYDIAAKT LKQLGKGLPE
SSLMFAKFSP DGKKVAYVSK HNVYVEDLAA STVKQVTTDG TDRVINGTFD WVYEEEFDCR
DGFRWSDDSK SIAYWQLDAR KIRNFLMINT TDSIYSFNVP VEYPKVGETP SPYKIGVVDV
ASAQTKWMNI PGDPQNTYVP RMEWSGMPNE LVIQQLNRKQ NESTLFYINT TDGSAKPFYS
EKDEAWIDIK SRWDNDPVGW DWINGGKEFL WVSEKDGWRH TYRVSRDGKK ETLITVGNFD
LISPVRIDEK NNAYYFMASP DNATQSYLYK TTLDGKGTLV RITPADQAGS HNYDISPLAK
FGRHQFSNAK TSPLVEWISF PKHVSIDPNN SIAQSKDKIN ASKTNIEFFK VKIDEGVEID
AWMVKPTNFD PNKKYPIVFT VYGEAAGSTV KDVWGTGKNR LYAGNMADDG YIYASIDNRG
TPSPKGAKWR KAIYRNIGRI NIKDMDGAAT AMFRQFAFID TSRVAVHGWS GGGSSTLNLL
FQYPQHFKTG IAVAAVANQL TYDNIYQERY MGIPQENRED FVKGSPITHA KNLRGNLLYI
HGTGDDNVHY QNAEMLVNEL IRANKVFQFM PYPNRSHSIS EGEGTMVHLR SLFTDYLKKN
CPPGAR