Gene Dfer_3642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3642 
Symbol 
ID8227227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4439665 
End bp4440669 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content55% 
IMG OID644931474 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_003088012 
Protein GI255037391 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.176241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAAAAAC TTACACTCGA TACTTTGTTT TACTATTTCT CGCGCTTTCT GGTCCGGCTG 
GCATTGCCCA TTTACCTCAG AAAACTTTGC GTTTCCAATT TCGACAAACT GCCCAAAGGG
GCGCCGTTGC TGCTCGCATC CAACCATCCC GATTCGTTTT TCGACGCCGT CGTGATCGGC
TCTGTGCTCG AACAGCCCAT TCATACCCTC ACCCGCGGCG ACGTTTTCCG CAAAAAGGCG
GCGGCATTCT GGCTGCGGCA GATCAATCTG ATCCCTGTTT TCCGCGGCTC GGAAGGACGG
CAATATGTTA AAAACCATGA CGTTACCGCC CAGGAAAGCC ACGACGCGCT CAAACAGGGT
GATGCCGTGG TGGTGTTCTC AGAAGGTGTT TGTGTAAATG AATGGCGCCT GCGCCCCCTC
GGCAAAGGCA CTGCGCGCAT GGCCTATAAG ATCTGGTACG GCGACGATGC CCTGCGGAGC
ATGAAAGTGA TCCCGACGGG CCTTAACTAC GAAAACTTCC GCGGCCCCGG CAAGCGTGTA
TCGCTCAATT TCGGCGAAGC CATTGCCGCC GACCACCTGC AAACCAGTCC GCAGGAATAT
GAAAAATGGC TTCGGGAATT CAACGAAATC CTCGACCGCA AAATGAATGC GGAGATTCTC
ACCATCCCCG CCGATCTGCC CAAAGCGGAA CAGCAGCGAC AGCTCAATGC ATTTTTCGAC
CAATGCGCCG CACCGAAGAC TCAAAGCAAC CCGTTGCTGG GCGCAATCGG CTGGCTTGGC
CGAATGGTGC ATTTGCCCTT ATACTCATTC TTCCGCAAAA AAGCAGCCAA ACTCACCGCC
CGATCGGTAT TCTACGACTC AGTGCTGTTC GGGATGCTGC TCTATCTGTA CCCGGTAATC
GTGACCTTGC TTTCGATTGT CGTGGTGGCA GTTACGGGTT GGGAAGTGGG GCTAGGGCTG
TTTGTAGGCT TGCCGTTGCT GGCGTGGGTG GGGAGTAAGT ATTAG
 
Protein sequence
MQKLTLDTLF YYFSRFLVRL ALPIYLRKLC VSNFDKLPKG APLLLASNHP DSFFDAVVIG 
SVLEQPIHTL TRGDVFRKKA AAFWLRQINL IPVFRGSEGR QYVKNHDVTA QESHDALKQG
DAVVVFSEGV CVNEWRLRPL GKGTARMAYK IWYGDDALRS MKVIPTGLNY ENFRGPGKRV
SLNFGEAIAA DHLQTSPQEY EKWLREFNEI LDRKMNAEIL TIPADLPKAE QQRQLNAFFD
QCAAPKTQSN PLLGAIGWLG RMVHLPLYSF FRKKAAKLTA RSVFYDSVLF GMLLYLYPVI
VTLLSIVVVA VTGWEVGLGL FVGLPLLAWV GSKY