| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3629 |
|---|
| Symbol | |
|---|
| ID | 8227214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 4423639 |
|---|
| End bp | 4424757 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644931461 |
|---|
| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
|---|
| Protein accession | YP_003087999 |
|---|
| Protein GI | 255037378 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATACA AGATTTACCT CTCACCCCCG CACATGAGCG GGCGGGAGCA ACAATACGTC
CGCGAGGCAT TCGACAGCAA CTGGATTGCA CCCGTGGGCC CGAATATCAA TGTGTTCGAG
GAGGAGTTAT GTGCATATAC GGGCAGCAAG CATGCGCTCG CGCTGGCATC CGGCACGGCG
GCGCTGCATC TTGCATTGCT GGCGTTGGGG ATCGGGCTGA GCGACGTCGT CCTTTGCCAG
TCACTCACGT TCGTGGCCAC TGCCAATCCG ATCGTGTACG TGGGCGCGAC GCCCGTTTTT
ATCGATAGCG AGCCGGTGAC CTGGAATATG TGCCCCAATG CACTGGAAGA TGCCATCCGG
CATTACATCC GGATCGGGAA AAGGCCTAAG GCCATCATCG TCGTGCATTT ATATGGAATG
CCTGCTATGC TGGATGAAAT TCTGTATTTG TGCAAAAAGC ATGACATTCC GCTAATCGAG
GACGCGGCCG AAGCGCTGGG TGCGGAATAT GGCGGCAGCA AGGTCGGTAC TTTCGGTACG
ATCGGGATAT TTTCCTTCAA TGGAAACAAA ATAATCACGA CGTCCGGCGG CGGTGCGATG
GTTTCCATTT CCCCTGAATA CCTGGAAAGA GCCCGGTTCC TGGCCACGCA GGCGCGGGAG
CCGTCACGGC ATTACGAGCA TCATGAAGTA GGATACAATT ATAGGATGAG CAATGTGTGC
GCCGGAATAG GGCGTGGGCA ATTGGAGGTG ATCGATGAAA GAGTTGCGCA GCGCCGGTCA
AACTTTCAGT TTTATCAACA TTATTTCGAA GGTATTGCTG AAATCGGCTT TCAAACGGGC
ATTGCCGAGA CTTTTTCCAA CCGCTGGCTG ACGGCGCTCG TCATTGAGGG CAACCGTGCC
AGTCCTGCCG ACATTCAAAC TGCGTTGCTG GCGCATGGCA TCGAATCGCG TCCGGTGTGG
AAACCAATGC ATTGCCAGAA AATATACGAA ACGCTACCCC GGTTTGGAGG TAGCGTTTCG
GAAAGATTGT TCGAGCGGGG AATGTGCCTG CCGTCCGGTT CAAATCTCGG TGAAGCCGGG
CGGGAGCTGG TAGCCCGCAT CGTCAGAAGT TGTTTTTGA
|
|---|
| Protein sequence | MEYKIYLSPP HMSGREQQYV REAFDSNWIA PVGPNINVFE EELCAYTGSK HALALASGTA
ALHLALLALG IGLSDVVLCQ SLTFVATANP IVYVGATPVF IDSEPVTWNM CPNALEDAIR
HYIRIGKRPK AIIVVHLYGM PAMLDEILYL CKKHDIPLIE DAAEALGAEY GGSKVGTFGT
IGIFSFNGNK IITTSGGGAM VSISPEYLER ARFLATQARE PSRHYEHHEV GYNYRMSNVC
AGIGRGQLEV IDERVAQRRS NFQFYQHYFE GIAEIGFQTG IAETFSNRWL TALVIEGNRA
SPADIQTALL AHGIESRPVW KPMHCQKIYE TLPRFGGSVS ERLFERGMCL PSGSNLGEAG
RELVARIVRS CF
|
|---|
| |