Gene Dfer_3620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3620 
Symbol 
ID8227205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4416717 
End bp4417796 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content51% 
IMG OID644931452 
Producthypothetical protein 
Protein accessionYP_003087990 
Protein GI255037369 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00523905 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.600946 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTTGC ATCCTGAAGA AAACCAACAA CTATTCTATT TTTGCAAAAA AATCGATCTG 
AAAATGCGTA GAGATTTCGA CTTGAGAAGA GTATCCGGAG CACTGGCTTT TGTCCTGGTT
TTGGGGCTTT TAATGTCTGC TAAAGACGTG AAGGCACAGA GCCGGGGGTT CTTTGTTCCC
TATTCTACGG CAGGTTTTGG AATTGGTACT TCCAACTACT ACGGCGACTT TGCACCTTAC
CGCCGTCCAC TGGCCTCCAC GTTCAAAATG ATGCGGTGGA GCATCGGTGG AAACTACACA
CGCCACTTTA CACCACGCCT GGCCGCACGC GCCAGTTTCA TTTACGCCCG GATCGCCGGT
GACGATTACA TTATGAACCG CGATGCGAAA CATGAAACCA GCATTTTTTA CGCGCGGAAC
CTACATTTCC GCAACGACCT GAAAGAATTC TCCGTTCAGG GTATTTTCAA GCTTACTCCC
GACAACCGCA GCTACGACCG CCGTCCTCAA CTGGGCGCTT ACCTGTTTGC CGGCGTTGCG
CTTACGGCAC ATAACCCCAA AGCCCTCGAT TCACTCGATG GCGACTGGGT GAAATTGCAG
CCGCTGGGAA CGGAAGGACA GGGTAACGAG GGTTACAAAA AGCCTTATTC ACTCGTTCAG
TTTGCCATTC CGGTGGGTAT CGGCGTTCGC TATAAAATCA ATTCCAAGTT TGATATTTCG
GCTGAACTGG GTTTCCGCAA GACATTTACC GATTACCTTG ACGACGCACA TGGCAATTAT
GCCGATCCTG CGCTCTTCGC CGACGATCCG CTGGCAGCCA GGATGGCCAA CCGCTCTGCC
GAGCAGTTTG CCGTGCGGAA AGGTGTAGAC CGGACAGACG GCGTGAGAAG GTTCCTGGAA
ACTAATTACC CGAACCTCGG TGACTATAAT AACCCGCTGG CTTTGTTGCC TACCACAGGA
TTCGGTGCGC CGGGAACTGG TAGAGGAAAC AGTCCGACTT ACACCGACAA CTATCTGTTC
GGCATGATCC ACATTCATTA TATGCTTCCA TCGCAAATCA AATGTCCGCC ACTGAGATAA
 
Protein sequence
MVLHPEENQQ LFYFCKKIDL KMRRDFDLRR VSGALAFVLV LGLLMSAKDV KAQSRGFFVP 
YSTAGFGIGT SNYYGDFAPY RRPLASTFKM MRWSIGGNYT RHFTPRLAAR ASFIYARIAG
DDYIMNRDAK HETSIFYARN LHFRNDLKEF SVQGIFKLTP DNRSYDRRPQ LGAYLFAGVA
LTAHNPKALD SLDGDWVKLQ PLGTEGQGNE GYKKPYSLVQ FAIPVGIGVR YKINSKFDIS
AELGFRKTFT DYLDDAHGNY ADPALFADDP LAARMANRSA EQFAVRKGVD RTDGVRRFLE
TNYPNLGDYN NPLALLPTTG FGAPGTGRGN SPTYTDNYLF GMIHIHYMLP SQIKCPPLR