| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3602 |
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| Symbol | |
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| ID | 8227187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4399864 |
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| End bp | 4402077 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644931436 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_003087974 |
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| Protein GI | 255037353 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.436547 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTACAGC AGGTTGATAA AGTCATTAAC GACACATTGA AAGGAAAGCT TAAAGAAATA
TTTGGATACA GTCAATTCCG CGGAGATCAG GAAGTTATCA TACAAAATAT ACTCTTAGGT
AAAAATACAT TCGTGATTAT GCCCACGGGC GCGGGGAAGT CACTCTGCTA CCAGCTTCCT
GCCCTTGTGA GCGACGGACT GACCATCGTT ATTTCCCCGC TGATCGCCCT GATGAAAAAC
CAGGTCGACC AGCTTACCGC GTTCGGTATC AATGCGCAAT TCCTGAACTC CACTCTTACC
AAAGCTGAAA TGACGCGCGT CAAAACCGAT GCGCTCGACG GGACTCTCAA ACTGCTCTAC
ATTGCGCCTG AATCGCTCAC AAAAGAGGAT AACCTCGATT TTCTCAAAAG GGTGAAAATC
TCCTTTGTAG CCATCGACGA GGCACACTGT ATCTCGGAAT GGGGCCACGA TTTCCGGCCC
GAATACCGTC GTATTCACGG CATTATCGAG AATATCGGCA ACTTGCCCAT TATCGCGCTC
ACGGCCACAG CAACGCCGAA AGTGCAGCAG GATATCCGCA AAAACCTGCA AATGGAGGAG
GCCGAAACCT TCAAATCGTC CTTTAACCGG AAAAATCTTT ACTACGAGAT CCGCCCGAAA
AAAGACGTCA AAAAGCAGCT CATCCGCTAT ATCCGTAATA ATAAAGGCAA ATCGGGCATT
GTATATTGCC TGAGCCGCAA AACGGTGGAA GAGGTGGCCG AGCTGCTGAA CGTCAACGAC
GTACGTGCAT TACCGTATCA TGCCGGCCTC GATGCCAATA CCCGGATGGC GAATCAGGAC
GCGTTCCTGA ACGAGGAATG TGACGTGATC GTGGCGACCA TCGCATTCGG AATGGGTATC
GACAAACCGG ATGTGCGCTT CGTGATCCAC TACGACGTAC CCAAGTCGCT CGAAGGCTAT
TACCAGGAAA CAGGCCGCGC CGGCCGCGAC GGGCTGGAAG GCAACTGTCT GATGTTTTAC
AGCTATGACG ACATTCAGAA GCTTGAAAAG TTCAACAAGG ACAAAACCGT TACAGAACGC
GACAATGCAC GCCATTTGCT CAATGAAATG GTCGCCTATT CGACATTGGG CGTGTGCCGC
CGCCGCCAGT TGTTGAGCTA TTTCGGCGAA TATCTTGAAA AAGATTGCGG CTATTGCGAC
AACTGCAACA AGCCGACCGA GAAGATCAAA GTGCAGGACG ACGTGATCCT GATCCTCAAA
TCGGTACTCC TCACCGAACA GCGCTTCGAC GCCGACCATA TTGCCGACCT GCTCACATCC
ACCGATAACC AGTACGTAAA AAGCTACGAA CATGACCAGC TCGATGTATT CGGCAAAGGC
CTGGAACTGA ACGAATCACG CGATTACTGG GTGTCGGCGA TCCGCCAGTT GGTGATTTTT
GGTTATCTGG AAAAGGATAT TGAAAACTAT GGCGTGATCA GGCTGTCGGA AAAAGGCGGC
CGTTACCTGA ACGACCCTTA TCCGGTGACG CTCCATAAAG ACCATAATTT CGACGAGGAG
GAGATAAAAG CGGACGACGA CGACAAAGAA TCGGGCAACG GCAATGGCAG CGCACATGCG
TACGACGAGG CATTGCTCGG AATGCTCAAA GCATTGCGTA AAAAGGTGGC CAAGGATAAA
AACCTGCCGC CGTACGTGAT CTTCCAGGAC CCTTCGATGG AAGAAATGGC GACGACCTAC
CCGACTACCC AGCAGGAAAT GGCGCAGATC AACGGCGTCG GAATGGGCAA GGTGCAGAAG
TTCGGCAAAC CATTCATCGA GCTCATTTCA CGGTATGTGG AGGAAAACGA GATCGAAACA
GCGAAGGACG TGGTGATCAA ATCCACGGTG AACAAATCCA AAATCAAGAT TTTCATCATC
CAGCAGGTCG ACCGCAAGGT GAGCCTCGAC GAGATCGCCG AAGTAAAAGA CCTCGCGCTG
GCCGATGTGA TCGAAGAAGT AGAGCACATT TGCTATTCCG GCACGAAACT GAACCTGGAT
TATTACATTA ACCAGGTAAT CGACCGTGAG CGGCAGAAGG ACATTTACGA TTATTTTATG
ACGGCCGAGA CCGACAATAT CTCTACTGCC TTGCATGAAT TCGACGGCGA GGAAGTGAGT
GAAGAAGAAT TAAGACTCAT GCGTATCAAA TTCTTGTCGG AGCTGGCCAA CTAG
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| Protein sequence | MVQQVDKVIN DTLKGKLKEI FGYSQFRGDQ EVIIQNILLG KNTFVIMPTG AGKSLCYQLP
ALVSDGLTIV ISPLIALMKN QVDQLTAFGI NAQFLNSTLT KAEMTRVKTD ALDGTLKLLY
IAPESLTKED NLDFLKRVKI SFVAIDEAHC ISEWGHDFRP EYRRIHGIIE NIGNLPIIAL
TATATPKVQQ DIRKNLQMEE AETFKSSFNR KNLYYEIRPK KDVKKQLIRY IRNNKGKSGI
VYCLSRKTVE EVAELLNVND VRALPYHAGL DANTRMANQD AFLNEECDVI VATIAFGMGI
DKPDVRFVIH YDVPKSLEGY YQETGRAGRD GLEGNCLMFY SYDDIQKLEK FNKDKTVTER
DNARHLLNEM VAYSTLGVCR RRQLLSYFGE YLEKDCGYCD NCNKPTEKIK VQDDVILILK
SVLLTEQRFD ADHIADLLTS TDNQYVKSYE HDQLDVFGKG LELNESRDYW VSAIRQLVIF
GYLEKDIENY GVIRLSEKGG RYLNDPYPVT LHKDHNFDEE EIKADDDDKE SGNGNGSAHA
YDEALLGMLK ALRKKVAKDK NLPPYVIFQD PSMEEMATTY PTTQQEMAQI NGVGMGKVQK
FGKPFIELIS RYVEENEIET AKDVVIKSTV NKSKIKIFII QQVDRKVSLD EIAEVKDLAL
ADVIEEVEHI CYSGTKLNLD YYINQVIDRE RQKDIYDYFM TAETDNISTA LHEFDGEEVS
EEELRLMRIK FLSELAN
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