Gene Dfer_3599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3599 
SymbolanmK 
ID8227184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4395563 
End bp4396804 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content54% 
IMG OID644931433 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_003087971 
Protein GI255037350 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.284371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGAAC ACGTTGAAAA GCTTCACGCG CTGAGCCGCA AGCCGTCGCG CAGGATCATC 
GGGCTGATGT CGGGTACCTC GCTCGATGGG CTGGATGTGG CACTTTGCCG CGCGGAAGGC
AGCGGGCCGG AGACCCGATT GCAGGTGGAG TATTTCAAAA CGGTGCCTTA CGATGAGGCG
TTCAGGAATG CCATTCGGGA GATTTTTGCC AAAAGGCAGA TCGATTTTCA GCAACTGGTG
TTGCTAAACC CGCTGATTGG GCTGCAACAT GGGCAAATGA TCCTCGACTG TCTGACCGAA
TGGGGCATCG GCCCACAGGA AATCGACCTT ATCGCGAGCC ACGGGCAAAC CGTTTTCCAC
GCGCCGCAAA AGCAGCACGG CGTTGCGGGC TTTCCCAATG CCACGTTGCA GATCGGCGAC
GGCGATCATA TCGCCGTGAA AACCGGCATA ATTACGCTCA GCGATTTCAG GCAAAAACAC
ATTGCGGCGG GTGGCGAAGG AGCCCCGCTG GCTGTGTACG GCGATTATTT CCTGTTTTCT
CAAAAAAACG AGAACCGGAT TTTGCTGAAC ATGGGCGGCA TTGCCAACTT TACATTCCTG
CCCGGCAACC TGGATGCTTC GGTGGTTTTC ACCACCGATA CCGGTCCCGG AAATACATTG
ATCGACGCTT TCACACGCCT GCATTTCGGC AGGCCGTTTG ATGAAAACGG CGAAATCGCC
GCCAGCGGGA CCATTGATCC TGCATTGCTG AATGCATTGA AGGACGCCCC GTTTTTTGAA
CAGCCATTTC CCAAAACCAC CGGCCCCGAA GTTTTCAGCA TGGATTATGT GAAAAATGCC
ATGCAGGTTT CCGGCCGTCT TGCCATTGAA CCGAAAGATC TGATAGCGAC ATTAACCCAA
TTCAGCGCAG AGACGATCTC CGAAGCTATT CACAATGCAA TGCAAAAAGG TGAAGCGATA
GTAACGGAAA ACGGAGAAAT AAATGCAATG CAAAGCGGCG GGGTATTTGA AGTTTACGCG
AGCGGCGGCG GTGCGCATAA TCCCGCATTA ATGGGCGCGA TCGGTAAGTT GCTGGGCCGG
AATATCCGCC TGATCGATGA ATTGGGCGTG GCGGGCGATG CGAAAGAGGC AGTCCTGTTT
GCTGTGCTGG CTAATGAGGC CGTTGCGGGC GAGGCGGTAT ATTTCGGTGA AAAGAAAGGC
GTACCGGGCG TTTCGATGGG GAAAATCTCC TTCCCCGGTT AA
 
Protein sequence
MKEHVEKLHA LSRKPSRRII GLMSGTSLDG LDVALCRAEG SGPETRLQVE YFKTVPYDEA 
FRNAIREIFA KRQIDFQQLV LLNPLIGLQH GQMILDCLTE WGIGPQEIDL IASHGQTVFH
APQKQHGVAG FPNATLQIGD GDHIAVKTGI ITLSDFRQKH IAAGGEGAPL AVYGDYFLFS
QKNENRILLN MGGIANFTFL PGNLDASVVF TTDTGPGNTL IDAFTRLHFG RPFDENGEIA
ASGTIDPALL NALKDAPFFE QPFPKTTGPE VFSMDYVKNA MQVSGRLAIE PKDLIATLTQ
FSAETISEAI HNAMQKGEAI VTENGEINAM QSGGVFEVYA SGGGAHNPAL MGAIGKLLGR
NIRLIDELGV AGDAKEAVLF AVLANEAVAG EAVYFGEKKG VPGVSMGKIS FPG