Gene Dfer_3580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3580 
Symbol 
ID8227165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4374705 
End bp4375529 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content52% 
IMG OID644931414 
Producthypothetical protein 
Protein accessionYP_003087952 
Protein GI255037331 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.297829 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT CGCTGTTCAT CCTGGCCTGG CTATTGGCTA TCATATTGCA GTCGTGCAGT 
CTTTTTACGG CCGTAGACCC GCTTCCGCCG GCATTTTCGA CGCTGGAAGT TGTGGATATC
AAACGCAATG AGATCACCGT GACCGGCACG ATCAGGAATC CGGACAGCAA GAACGACAGG
CAGGAGAAAA AAAGCGGCAC GATCGTCGAA TATGGCCTGG TGTACGGAGC CGGACCGTCG
CTCGACATTC AGAAAGACAA AGCGATCAAA CTGGGCGACA CTCCCGCGCA GGTGCCGGTT
TCAATTCAAA ACCAGAAAAT AACCGGCCTT GCTTCCGACA CACGCTACTA TGTGGCCCTG
TATGCCCGCA ATGAAGGTGG CGGAATGGCT TACAGTGATG TACTGGACGT AAAAACCACA
CTTTTGCCCC CGGCGGTCAT TACCCAAAAC TCGGTAAAAG TGGCTAAAAC CGGCTCGCTG
TGGTACGACT TCGACGCAGG CAATGCAGTG ACGGCCGGTG ACCCGAAAAC GGATGTGACG
ATCAATTCCT ACTCCATCAC CGGTAGAGGA ACTGTGCTGG AAATCAACAC TACGGGCAGT
GTTCAATTTA TCAACCTCGG CGTGGCGGAC TACGATAAAC TCACTTACCT GGATCTTGTC
CGCGTTACCG GATACAACAA TACCGCCATA TCGTACCTGT TCAACGCGCA GACGATCAAC
ACCGTCATCG CATTCAAAAC CGGCGAAGGC AGGCTTGGAA AATGGCGGAT CGAGGGCGTA
TCGTCCAGTG AGATCACGAT GAGCCTCATC ACTTACGAAA ACTAG
 
Protein sequence
MKKSLFILAW LLAIILQSCS LFTAVDPLPP AFSTLEVVDI KRNEITVTGT IRNPDSKNDR 
QEKKSGTIVE YGLVYGAGPS LDIQKDKAIK LGDTPAQVPV SIQNQKITGL ASDTRYYVAL
YARNEGGGMA YSDVLDVKTT LLPPAVITQN SVKVAKTGSL WYDFDAGNAV TAGDPKTDVT
INSYSITGRG TVLEINTTGS VQFINLGVAD YDKLTYLDLV RVTGYNNTAI SYLFNAQTIN
TVIAFKTGEG RLGKWRIEGV SSSEITMSLI TYEN