Gene Dfer_3571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3571 
Symbol 
ID8227156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4365094 
End bp4366212 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content56% 
IMG OID644931406 
Productpeptidase S58 DmpA 
Protein accessionYP_003087944 
Protein GI255037323 
COG category[E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3191] L-aminopeptidase/D-esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.985399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.76681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACC TGCTCTCACT CCTGCTCCTG CTTCCGCTTA CTCTCGCCGC CCAGAAACGT 
CCCCGCGAAC TCGGTATTAA AATAGGCGTG CTGCCCACAG GTGCATTGAA CGCGATCACC
GATGTGGCGG GTGTGAAGGT AGGCCAGGTA ACCCTCACGG AGGGCGCGGA CGTGCGCACA
GGCGTAACGG CCATTCTCCC GCACGACGGC AATATTTTCC AGCAAAAGGT GCAGGCGGCC
ATGTACATCG GGAATGGATT TGGCAAAATG ACGGGCTACT CGCAGGTTGA AGAACTTGGT
ACCATCGAAT CGCCCATTGT GCTCACTAAT ACATTGAGCG TCCCCACCGC CGCCGACGCG
GTGATTGACT GGACGCTGGC GCAGAAAGGG AATGAAAATG TACGATCGGT GAACCCGGTA
ATCGGCGAAA CGAACGACGG CTTCCTGAAC GATATCCGCG GCCGCCACGT ACGGAAAGAC
CATGTGCTGA ACGCATTAGC TCAGGCAGAA AACGGCCCCG TGGTGGAAGG TAATGTAGGT
GCAGGCACCG GCACGGTTTG TTTCGGCTGG AAAGGCGGCA TCGGCACAGC GTCGCGCAAG
CTGCCCGAAA AGCTTGGAAA ATACACCGTG GGCGTTCTGG TGCAAACCAA TTTTGGAGGT
GTGTTAAAAG TAAACGGCGT GCCTGTGGGC GAAGAACTGG GCCAGTATGC ATTCAAGGAA
TCGCTCGACA AATCGTCGGA CGGCTCGTGC ATGATGATCC TCGCCACCGA CGCCCCGCTC
GACGCCCGCA ACCTGAAACG GCTCGCCAAG CGTGTAATGC TGGGCATGGC GCAAACCGGC
GGCATTGCAG CCAATGGAAG CGGCGACTAC GTGATCGCAT TCTCGACCGC CAACAAGGTT
TTGCACGAAA CCTCGGAACC GGTGCTCAGC GCCGCTTACC TGCACAATGA CTACGTATCA
CCACTCTTCA TGGCGGCAAT GGAAGCTACG GAGGAAGCCA TTATCAATTC GCTTTTCATC
GCCAAAACTT CGGAGGGCAC TCAGGGACAC AAGGTAGAGG AGCTTCCCAA AGACAAGGTG
ATGGAGATCA TGCGTAAGTA CGGACGCATT AAGGAATAG
 
Protein sequence
MKNLLSLLLL LPLTLAAQKR PRELGIKIGV LPTGALNAIT DVAGVKVGQV TLTEGADVRT 
GVTAILPHDG NIFQQKVQAA MYIGNGFGKM TGYSQVEELG TIESPIVLTN TLSVPTAADA
VIDWTLAQKG NENVRSVNPV IGETNDGFLN DIRGRHVRKD HVLNALAQAE NGPVVEGNVG
AGTGTVCFGW KGGIGTASRK LPEKLGKYTV GVLVQTNFGG VLKVNGVPVG EELGQYAFKE
SLDKSSDGSC MMILATDAPL DARNLKRLAK RVMLGMAQTG GIAANGSGDY VIAFSTANKV
LHETSEPVLS AAYLHNDYVS PLFMAAMEAT EEAIINSLFI AKTSEGTQGH KVEELPKDKV
MEIMRKYGRI KE