| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3569 |
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| Symbol | |
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| ID | 8227154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4361670 |
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| End bp | 4364033 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644931404 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003087942 |
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| Protein GI | 255037321 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.557391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.493539 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACA GAATACTCAA CTGCCTTCTA TTAGCCTTGA TTAGCCTGCC GGCCCTCGCA
CAAAACCGGC ATTCGGTGAG CGGTTACGTG AAAGACAATA AGAATGGGGA AGGGCTCATC
GGTGTCTCCG TTTATGTGCG TGAGGCCGAA ACCGGCGTGG TCACCAATCC GTATGGCTTT
TACTCGCTCA CATTGCCCGA CGGGAAGTAC ACACTGGTAT TCACCTACAT CGGCTACCAG
AAAGTGACCC GCGAAGTGGT GCTCGACGGC GACAAAACCG TGAGCATCGA AATGACCGAC
GAAAGCAACG AGCTCGCCGA AGTCACCATT TCTACGCAAA AGGAGGATGA GAACGTCCGC
AGCATCGAAA TGTCGGTGAA CAAGGTGGAA ATGAAAACCA TCCGCAAAAT GCCCGCATTG
CTCGGCGAGG TTGACCTGAT CCGCAGCATT CAGCTGCTTC CCGGTGTCAC GGCCGTGGGC
GAAGGTGCTT CGGGTTTCAA CGTGCGCGGC GGGGATGTTT CGCAAAACCT GGTACTGCTC
GATGAAGCGC CGGTTTACAA CTCTTCTCAC TTGTTCGGCT TCTTTTCGGT ATTCAACCCG
GATGCCGTGA AGGACGTGAA ACTGATTAAA GGTGGTATTC CAGCGCAATA TGGCGGCCGG
ATTTCATCCA TCCTCGACGT TCGGATGAAA GAAGGTAATG CCAAAAAACG CGAAATCAAT
GGCGGTATCG GCTCCATTTT CTCACGTTTG ACATACGAGC AGCCTTTTGC TAAGGGAAAA
GGGTCGTTCA TCGTGGCTGG CCGTCGTTCG TACATTGACG TACTGGCCAA GCCATTTCTG
AACTCGGATT TGAAAGATTC GAAATTCTAT TTCTATGATC TGACGGCGAA GGTGAATTAT
CAATTGGGTA ACAAGGATAC ATTCTATGCG TCGGGTTATT TTGGAAAAGA CGTGTTCGGC
GGCGGCGATT TCGGCTTCGG ATGGGGTAAT GCAACGGCTA CCGCGCGGTG GAACCACATT
TTCTCCAACA AGCTTTTCAT GAACCTGACC GGTTATTACA GCAACTACGA CTATAACCTC
GGCCAGAACC AGAACAAGCC TGATGCCAAG GATCGGTTCG ACTGGAAATC CAAGATCATC
AGCACGAGCA TCAAGCCGGA TTTTACATTC TATATCACGC CTAACAACCA ACTCACGTTC
GGCGGCCAGT ACATATATTA TGACACGCGC CCTGGCAAAG CGACCTTCGT TTCGGAAGGC
GATATGCAGG ACATCAGCCT CGAACCGCGC TATGCCGATG AATCCGCATT GTATGTAGGC
AATGAGCTGA AATTCGGCGA CCGCATTTCA TTGCAATACG GTGTGCGCTA CTCCTACTTC
CGCAGCCTCG GCCCGGCCAC CGAGTACGAA TATGCCGACA AAGGCAAAGG CATCCGGAAA
GAACCGGTTT TCCCCGGCAC GGAGTACAAA CGCGGCGATG TGATCAAGAG CTACGGTAAC
CTCGAACCAC GGGCGGCATT GAATATCGGG ATCACCAGCA ACGCGTCTAT CAAAGCCAGC
TACAACCGCA CTTCGCAATA CCTGCACTTG CTCTCGAACA CCGCCGCAAG CTCGCCGCTG
GATGTGTGGA CGTTGAGTGG AGTCAATATC AAACCGGAAA AGGCCGATCA GGTTGCAATA
GGCTGGTTCC AGAACTTCCA GGATAACACT TACGAGGCAT CTGTTGAATT GTACTACAAA
AAACTATACA ACCAGATCGA CTACGTGCCC GCTTCGGACC TGCTTTTGAA CGAATATGTG
CCCGGCGACC TGCTATTCGG CAAAGGCCGT GCTTACGGAG CGGAGTTTTA TCTGAAGAAA
AACAAAGGCC GCCTCACCGG CTGGGTGAGC TACACATTGT CCAGAACAGA ACGTTTGGTA
GAATCCATCA ACAACGACGA CTGGTTCCCT GCACGTTTCG ACAAACCGCA TAACATCACG
GCAGTTGCCA TTTACGAGTT GACTAAACGC CTCTCATTGT CTTCGAACTT CACCATTCAG
AGCGGCACGC CGGCCACATT CCCGACGAAC CGTTACAGCA CTGGTGGTTT TGAAATTGGC
AATAATTACA ATGGACTTCG CAATAATAGC CGCATACCGG CCTACCACCG TCTGGATTTG
GCTGCAACCT TGAAATCGAA GAGAAAATTA TTCAAGGTCG GCGAGGGAGA ATGGGTATTC
TCGGTTTACA ATGTTTACAA CCGCCGCAAC CCGTTCTCGG TTTACACGCG GGTGAACGAG
GATAACCCGC TCAAAACGGA AGCTGTGCGC TATTCTGTGA TCGGGAACTT CATTCCTTCC
ATTACCTACA ACTTCAAATT CTGA
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| Protein sequence | MKNRILNCLL LALISLPALA QNRHSVSGYV KDNKNGEGLI GVSVYVREAE TGVVTNPYGF
YSLTLPDGKY TLVFTYIGYQ KVTREVVLDG DKTVSIEMTD ESNELAEVTI STQKEDENVR
SIEMSVNKVE MKTIRKMPAL LGEVDLIRSI QLLPGVTAVG EGASGFNVRG GDVSQNLVLL
DEAPVYNSSH LFGFFSVFNP DAVKDVKLIK GGIPAQYGGR ISSILDVRMK EGNAKKREIN
GGIGSIFSRL TYEQPFAKGK GSFIVAGRRS YIDVLAKPFL NSDLKDSKFY FYDLTAKVNY
QLGNKDTFYA SGYFGKDVFG GGDFGFGWGN ATATARWNHI FSNKLFMNLT GYYSNYDYNL
GQNQNKPDAK DRFDWKSKII STSIKPDFTF YITPNNQLTF GGQYIYYDTR PGKATFVSEG
DMQDISLEPR YADESALYVG NELKFGDRIS LQYGVRYSYF RSLGPATEYE YADKGKGIRK
EPVFPGTEYK RGDVIKSYGN LEPRAALNIG ITSNASIKAS YNRTSQYLHL LSNTAASSPL
DVWTLSGVNI KPEKADQVAI GWFQNFQDNT YEASVELYYK KLYNQIDYVP ASDLLLNEYV
PGDLLFGKGR AYGAEFYLKK NKGRLTGWVS YTLSRTERLV ESINNDDWFP ARFDKPHNIT
AVAIYELTKR LSLSSNFTIQ SGTPATFPTN RYSTGGFEIG NNYNGLRNNS RIPAYHRLDL
AATLKSKRKL FKVGEGEWVF SVYNVYNRRN PFSVYTRVNE DNPLKTEAVR YSVIGNFIPS
ITYNFKF
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