| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3539 |
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| Symbol | |
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| ID | 8227124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4321228 |
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| End bp | 4323780 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644931374 |
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| Product | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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| Protein accession | YP_003087912 |
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| Protein GI | 255037291 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACTA TAAAATCTTC ACAATCAGAA AGAACCTATA CCTCTGACGA GGCCTTTCAG
GCATCGCTGG AATATTTTAA GGGCGACGAC CTGGCGGCGC GCGTTTGGGT GAATAAATAT
GCGTTGAAGG ATTCCTTCGG CGCCATTTAC GAGGCCACGC CGGACGATAT GCACCACCGC
ATCGCGTCGG AGATCGCGCG CATTGAGCAG CGCTATCCGA ACCCGCTCAG CGAGGCCGAA
ATTTTCGATC TGATCAAGGA TTTTAAATAT ATTATCCCGC AGGGCAGCCC CATGACGGGC
ATCGGCAATC CGTACCAGAT CGCCTCGCTT TCGAACTGTT TCGTGATTGG TAACAATGGC
GAATCCGACT CCTATGGCGG CATTATGAAG ATCGACCAGG AGCAGGTGCA GCTCATGAAG
CGCCGCGGCG GCGTGGGGCA CGATCTCTCG CACATTCGCC CGAAAGGCTC GCCGGTAAAA
AACTCGGCAT TGACTTCCAC AGGCATTGTG CCGTTCATGG AACGTTTCTC CAACTCCACC
CGCGAAGTGG CGCAGGACGG CCGCAGAGGC GCGCTCATGC TTTCAGTGTC CATCAAACAC
CCTGATTCCG AAAGCTTTAT CGACGCTAAA ATGGAGCAGG GCAAAGTGAC CGGCGCCAAT
GTCTCCGTAC GCATCGACGA TGAATTTATG CAAGCGGTGG ACGCCGGAAC AACCTACCGC
CAGCAATATC CGATCCAAAG CCACACTCCG ACGCACATTA AAGACATCGA TGCGACGGCG
CTTTGGAAGA AAATCGTGCA TAATGCATGG CAATCGGCCG AGCCGGGTAT CCTGTTTTGG
GACACCATCA TCCGTGAGTC CGTGCCCGAT TGCTACGCTG ACCTGGGTTA TCAGACCATT
TCTACAAATC CCTGCGGCGA AATCCCGCTG TGCGCTTACG ACTCGTGCCG TTTGCTCGCG
ATCAACCTGT TTTCGTACGT CGAAGATCCA TTTACCGACA AGGCGAAGTT TAACTGGGAC
CTCTTCAAAA AGCATATCGC GGCTGCACAG CGCATGATGG ACGACATCAT TGATCTTGAA
CTGGAAAAAA TTGATGCAAT CCTTCAAAAA ATCGACGAAG ATCCCGAAGA TGCAGAGGTG
AAGCGCGTGG AGCGTAACCT TTGGCTGAAC ATCCAAACGA AAGCCAACGA AGGCCGCCGG
ACGGGCATCG GTATCACCGC CGAAGGCGAT ATGCTGGCAG CGCTGGGCCT TCGCTATGGC
AGCGACGAGG GCAATGCATT CGCGGTTGAA ATCCATAAAA CCGTTGCATT GGAAGCCTAT
CGCGGGTCGG TGCATACTGC AAAAGAGCGC GGTGCATTCA CGATCTTCGA TTCGGAAAGA
GAGAAAAACA ACCCGTTCAT CCTCCGTTTG AAAGAAGCCG ACGCGCAGCT TTATTACGAA
ATGCTCGAAT ACGGCCGCCG GAATATCGCA TTGCTTACCA TTGCACCAAC GGGAACAACT
AGCCTGATGT CTCAAACGAC CTCGGGCATC GAGCCGGTGT TTTTGCCGGT TTATAAAAGA
AGAAGAAAAG TAAACCCGAA CGACAAGGAC GTGCGCGTGG ATTTCGTGGA CGAAGTAGGC
GATTCGTGGG AAGAATATGT GGTTTTCCAC CATCGGTTTA AGCAATGGAT GGAGGTTAAC
GGGCTGGATA CCAGCAAGAA TTACGCGCAA AAAGACCTCG ACGAACTGGT TAAAAAATCG
CCTTACTACA AAGCCACTTC CAATGATGTG GATTACCTCA AAAAGGTAAA AATGCAGGGA
GCGATCCAGC AATGGGTGGA CCATTCGATC AGCGTGACGA TCAACATGCC GAACGACGTG
ACCGAAGAGC TCGTAGGTGA ATGCTATATG GAAGCATGGA AAGCGGGCTG CAAAGGCGTT
ACCGTATACC GCGACGGCTC ACGTTCAGGC GTTTTGATCT CTAACACGGA GAAAAAAGAA
GAAACGCAAG AAGGCGCTCC GACCCCATTC CCGACCGAGC GCCCGCAGAC GCTCGAAGCC
GATGTGGTGC GTTTTCAGAA TAAAAAAGAC AAATGGATCG CATTCATCGG GCTGATAGAC
GGCCGGCCGT ACGAAATCTT CACCGGTTTT GCAGACGATG AAGACGGTAT TCTGATCCCT
CGCTGGGTGA ATGAAGGCCT GATCATCAAA AACAGGGAAG CCGACGGCAG CTCACGCTAT
GATTTCCAAT ACAAAAACAC GCGCGGCTAC AAAACGACGA TCGAAGGGCT ATCCTACAAA
TTCAATCCCG AGTACTGGAA TTACGCAAAG CTGATTTCCA GCACATTACG CCACGGAATG
CCGATCGAAA AAGTGGTGGA CCTGATCAGC AGCCTCCAAC TCGACGAGGC GATCAACACC
TGGAAAGCCG GCGTAGCGCG CGCATTAAAA CGCTACATCC CCGACGGCAC CGAAGCCGCC
AAGCAAAAAT GCCAGAACTG CGGATCAACG AATTTGCTGT ACCAGGAAGG ATGTTTGACG
TGCAAGGACT GCGGATCGTC GAAGTGCGGG TGA
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| Protein sequence | METIKSSQSE RTYTSDEAFQ ASLEYFKGDD LAARVWVNKY ALKDSFGAIY EATPDDMHHR
IASEIARIEQ RYPNPLSEAE IFDLIKDFKY IIPQGSPMTG IGNPYQIASL SNCFVIGNNG
ESDSYGGIMK IDQEQVQLMK RRGGVGHDLS HIRPKGSPVK NSALTSTGIV PFMERFSNST
REVAQDGRRG ALMLSVSIKH PDSESFIDAK MEQGKVTGAN VSVRIDDEFM QAVDAGTTYR
QQYPIQSHTP THIKDIDATA LWKKIVHNAW QSAEPGILFW DTIIRESVPD CYADLGYQTI
STNPCGEIPL CAYDSCRLLA INLFSYVEDP FTDKAKFNWD LFKKHIAAAQ RMMDDIIDLE
LEKIDAILQK IDEDPEDAEV KRVERNLWLN IQTKANEGRR TGIGITAEGD MLAALGLRYG
SDEGNAFAVE IHKTVALEAY RGSVHTAKER GAFTIFDSER EKNNPFILRL KEADAQLYYE
MLEYGRRNIA LLTIAPTGTT SLMSQTTSGI EPVFLPVYKR RRKVNPNDKD VRVDFVDEVG
DSWEEYVVFH HRFKQWMEVN GLDTSKNYAQ KDLDELVKKS PYYKATSNDV DYLKKVKMQG
AIQQWVDHSI SVTINMPNDV TEELVGECYM EAWKAGCKGV TVYRDGSRSG VLISNTEKKE
ETQEGAPTPF PTERPQTLEA DVVRFQNKKD KWIAFIGLID GRPYEIFTGF ADDEDGILIP
RWVNEGLIIK NREADGSSRY DFQYKNTRGY KTTIEGLSYK FNPEYWNYAK LISSTLRHGM
PIEKVVDLIS SLQLDEAINT WKAGVARALK RYIPDGTEAA KQKCQNCGST NLLYQEGCLT
CKDCGSSKCG
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