Gene Dfer_3527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3527 
Symbol 
ID8227112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4308585 
End bp4309028 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content50% 
IMG OID644931362 
Producttranscriptional regulator, BadM/Rrf2 family 
Protein accessionYP_003087900 
Protein GI255037279 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.663609 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCTA AAAAAGCTAA ATACGCGCTG AAAGCCCTCA AAGTGCTCGC GGAACAATAC 
GGAAAAGGAC CGGTATTAAT CTCTTATATT GCTGAAAAAG AGAAGATTCC GAAAAAATTC
CTGGAAGCGA TCCTGCTCGA TTTGCGCAAT AACGGCGTGC TGCAAAGTCA GAAAGGCAAA
GGCGGCGGCT ATCTGTTGCG CGTGCCCCCG GGCGAGGTCA ATTTCTCGAA AGTGCTGCGG
ATCATCGACG GCCCCATTGC GCCGGCATTG TGCGTTTCGA TGTTTTTCTA CGGTAAATGC
GATGATTGTA AGGATGAAGA AACTTGCAGC CTTCGCACCG TGCTCGAAAG ATGGCGGGAT
GCCAACCTTG CGGTACTCGA TAAAACCACG CTGAGTGACC TGTTGCAGGC CGAAAACGCC
GCGTCGACAG ACATTCTATC GTAA
 
Protein sequence
MISKKAKYAL KALKVLAEQY GKGPVLISYI AEKEKIPKKF LEAILLDLRN NGVLQSQKGK 
GGGYLLRVPP GEVNFSKVLR IIDGPIAPAL CVSMFFYGKC DDCKDEETCS LRTVLERWRD
ANLAVLDKTT LSDLLQAENA ASTDILS