Gene Dfer_3525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3525 
Symbol 
ID8227110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4305601 
End bp4306068 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content51% 
IMG OID644931360 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003087898 
Protein GI255037277 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.681503 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGG AAAAAACTAT CGACTTCCAG ATCAAATGGG CCTGGCATTC TATTTCGAGG 
ATGTACAATG CCTATGCCGC CCGTTTCGAC ACAACGATGG CTGTCGGGTA TGTGCTGCTG
AATATCGACA TTGAAAACGG CACGCCAGCC ACCAAAATAG CGCCGTTGCT CGGTATGGAG
CCGCGCAGCC TGGTGCGGAT GCTCAAAAAC CTGGAAGAAA AAGGCCTGAT CCGCCGCGAA
GTGAGTAAGA ACGACAAGCG TTTCGTGCGC ATCGTGCTCA CGGAATTGGG CAAGGAAAAG
CGCGAACTGG CCCGCGAAGG CGTGATTTCG TTCAACACGA TGATCCGCGA TAAGATCCCG
CTTGAAAAGC TGGTCGTGTT TTTTGATGTG ATTAAAGACA TAAACCGATT GGTGGAGGAA
GAAAACCAGA AGCTGAAAGC CGGCGAGATC ACCGAAGACC TGGAGTAA
 
Protein sequence
MRKEKTIDFQ IKWAWHSISR MYNAYAARFD TTMAVGYVLL NIDIENGTPA TKIAPLLGME 
PRSLVRMLKN LEEKGLIRRE VSKNDKRFVR IVLTELGKEK RELAREGVIS FNTMIRDKIP
LEKLVVFFDV IKDINRLVEE ENQKLKAGEI TEDLE