Gene Dfer_3519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3519 
SymbolmraY 
ID8227104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4297775 
End bp4298989 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content53% 
IMG OID644931354 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_003087892 
Protein GI255037271 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.080321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATATT ATCTCTTTGA TTATTTAGAC AAGCAATTCA ACATTCCCGG GGCCGGGGTA 
TTCCAGTACA TCTCGTTCAG GGCGTTGGGC GCTACGGTTT TGTCACTTTT CATTGCCGCT
GCGTACGGAA AGTCTATCAT TAATCTGCTG CGGAGAAAGC AAATGGGCGA GTCGATCCGC
GACCTCGGGC TGGCCGGGCA AATGGAGAAG GCCGGAACGC CAACCATGGG TGGCTTCATC
ATCCTGGCGT CGCTGTTGGT GCCGGTGCTG CTGTTCGCGA AACTGAGCAA TGTATACATC
GTTTTGCTGA TCATCACGGC GGTGTGGACG GGCGGAATTG GGTTTTTGGA TGATTATCTC
AAGAAATTCA GGAATAATAA GGACGGCTTG CACGGCCGCT TCAAGATTGT CGGCCAGGTA
GGCCTTGGCG TGATCGTCGG CCTGACGCTA TCTTTCAACG ACAATGTCAA AATCCGCGTT
TACGAGCAGC CGGTGCTGAG TTCGAGCCTG GGCGAAGTGC AGCGCTACCG CGACATTATC
CACCCCACGG TAACGACCAT CCCATTCATC AAAAACAACG AATTTGATTA TAAAACGCTG
CTTTTCGGCT GGTTGCCCGA GGAATATACC TGGGTGATCT ACACCATTAT CGCGATTTTC
ATCATCACCG CCATTTCCAA CGGCGCCAAC ATCACCGACG GGATCGATGG CCTTGCGGCG
GGCGTTTCGG GCATTATCGC GCTCACATTG GGCGTGCTGG CTTATCTGTC GGGTAACACC
AAATTTTCGC AATACCTCAA CCTCATGTAT ATTCCCAACT CGGGCGAGCT GGTAATCTTC
TGTGCGGCCT TCATTGGGGC GTGCGTCGGG TTTTTATGGT ATAATGCGTA CCCGGCGCAG
GTTTTCATGG GCGACACGGG CAGTTTGATG CTCGGCGGGG TGATCGCGGT AGTGGCCCTG
GCCATCCGCA AAGAGTGGCT GATCCCGGTC ATGTGCGGGA TTTTCATTGT TGAAAACGCC
TCTGTGATCT TACAAGTCAG TTATTTCAAA TACACGAAAC GAAAATACGG CGAAGGCCGG
CGAATATTCC TGATGTCGCC GCTGCACCAC CATTACCAGA AGAAAGGCAT CCACGAAGCC
AAAATCGTGA CGCGTTTCTG GATTGTAGGC ATTATCCTCG CGATCCTCAC GCTGGCGACG
TTGAAACTGC GGTAG
 
Protein sequence
MLYYLFDYLD KQFNIPGAGV FQYISFRALG ATVLSLFIAA AYGKSIINLL RRKQMGESIR 
DLGLAGQMEK AGTPTMGGFI ILASLLVPVL LFAKLSNVYI VLLIITAVWT GGIGFLDDYL
KKFRNNKDGL HGRFKIVGQV GLGVIVGLTL SFNDNVKIRV YEQPVLSSSL GEVQRYRDII
HPTVTTIPFI KNNEFDYKTL LFGWLPEEYT WVIYTIIAIF IITAISNGAN ITDGIDGLAA
GVSGIIALTL GVLAYLSGNT KFSQYLNLMY IPNSGELVIF CAAFIGACVG FLWYNAYPAQ
VFMGDTGSLM LGGVIAVVAL AIRKEWLIPV MCGIFIVENA SVILQVSYFK YTKRKYGEGR
RIFLMSPLHH HYQKKGIHEA KIVTRFWIVG IILAILTLAT LKLR