Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3510 |
Symbol | |
ID | 8227095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4285843 |
End bp | 4286718 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644931346 |
Product | transglutaminase domain protein |
Protein accession | YP_003087884 |
Protein GI | 255037263 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGTATA AGCTGATCCA TAAAACCCAA TACAAATACG CGGAGGCTGT GAACAATTAT CACAGCCTCG TATGCCTCAC GCCGCGCATG CTACCCGACC AGCTTTGCCA GGATTTTAGC ATTAAAATTA CCCCGGAGCC GGCGCAGATT ACCGAACGGG TCGATTTTTA CGGAAATACC ACGCATTATT TTTCCCTGCA TTCGCCGCAC AAGACGCTTA CGGTGCTTAC GACGGCCATT GTCGAACGTC TTTCTGAAAG CACGGGCTCG CTGTTCATTC CGTCGTCCGT AACGAGCGGG GAGGCCCGGG AGCGGCTCAC GGGCGACCGC GCCACGAAAA TCTCTGTTTT GGAATACACA TTACCCAGCC CGCTCGTGAA ATGGGACTCG GAGATTCAGG CATTTGCCGC AGATTGCTTC GACGATAGTG CGCCGTTGTA TGAATGCATT GCGAAGCTTT GCAGCAAGAT TTACACGGAA TTTCAATTCG TACCCGACTT TTCGACGGTA AACACGCCTA TCAAAGAAGT ACTGGCGGCT AAAAAGGGCG TCTGCCAGGA TTTTTCGCAC CTGGCCATTG CCTGCATCCG CAGTTTCGGC TTCGCGGCGC GCTATGTGAG CGGATATCTC GAAACATTGC CGCCGCCGGG GAAGCCCAAG TTGCAGGGCT CCGACGCGTC GCATGCCTGG ATCTCGGTTT TTATCCCCGA TTACGGCTGG TGCGATTTCG ACCCGACGAA CAATGTCGTG CCGGGCGAGC GCCATATCGT CACCGCCTGG GGCCGCGATT ACAGCGATGT GCCGCCGCTG AAAGGCATCA TTTTCAGCTT TGGGAAACAC ACACTTGCAG TCGAAGTAGA TGTGATTCCC ATGTAA
|
Protein sequence | MKYKLIHKTQ YKYAEAVNNY HSLVCLTPRM LPDQLCQDFS IKITPEPAQI TERVDFYGNT THYFSLHSPH KTLTVLTTAI VERLSESTGS LFIPSSVTSG EARERLTGDR ATKISVLEYT LPSPLVKWDS EIQAFAADCF DDSAPLYECI AKLCSKIYTE FQFVPDFSTV NTPIKEVLAA KKGVCQDFSH LAIACIRSFG FAARYVSGYL ETLPPPGKPK LQGSDASHAW ISVFIPDYGW CDFDPTNNVV PGERHIVTAW GRDYSDVPPL KGIIFSFGKH TLAVEVDVIP M
|
| |