Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3509 |
Symbol | |
ID | 8227094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4284655 |
End bp | 4285635 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644931345 |
Product | Transketolase central region |
Protein accession | YP_003087883 |
Protein GI | 255037262 |
COG category | [C] Energy production and conversion |
COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAAA TAGCATTTAG AGATGCCATT CGCGACGCTA TGTCGGAAGA GATGCGCCTT GACAAGAGTA TTTTTTTGAT GGGTGAAGAG GTTGCGGAAT ACAACGGTGC TTATAAGGCG AGTCAGGGAA TGCTCGATGA GTTCGGTCCC GACCGCGTGA TCGATACGCC TATCGCGGAG CTTGGCTTTG CGGGGATTGC GGTGGGCGCT GCCGGAAACG GCCTCCGTCC GATCGTCGAG TTTATGACAT TCAACTTCTC GCTGGTGGCG ATTGACCAGA TCATCAACAG CGCGGCTAAG ATTCTTTCGA TGTCAGGCGG CCAGTACGGT TGCCCGATCG TGTTCCGCGG CCCGACCGGT AATGCAGGTC AGCTTGGTGC ACAGCACTCG CAGAACTTCG AAAACTGGTT TGCCAACACG CCCGGTCTGA AAGTGGTTGT TCCTTCGAAC CCTTACGACG CAAAAGGTTT GTTGAAATCG TCCATTCGCG ATAACAACCC GGTGATCTTC ATGGAATCGG AGCTGATGTA CGGCGATAAA ATGGCTGTTC CCGAGGAAGA ATACCTGATT CCGCTAGGTA AGGCCGATAT CAAACGTCAG GGTAAAGATG TTACCATCGT TTCTTTCGGT AAAATGATCC CCCGCGTGGT AATGCCTGCG GTGCTTCAAC TGGAAAAAGA AGGTATTGAC GTGGAAGTGA TAGACCTGCG CACCGTTCGT CCGATCGATT ATCCTGCGGT GATTGAATCA GTTAAGAAAA CCAACCGCTG CGTGGTGGTG GAGGAAGCGT GGCCTCTGGC TTCGATCTCT TCGGAAATCG CTTACCACAT CCAGCGCAAT GCATTTGATT ATATGGACGC GCCGGTGATC CGTGTAACGA GCCGCGACGT GCCTTTGCCA TACGCGCCAA CGCTGATCGA AGAGATCCTG CCTAACGTGA AGCGCACCAT AGACGCCGTG AAATCGGTGC TTTACAAGTA A
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Protein sequence | MKEIAFRDAI RDAMSEEMRL DKSIFLMGEE VAEYNGAYKA SQGMLDEFGP DRVIDTPIAE LGFAGIAVGA AGNGLRPIVE FMTFNFSLVA IDQIINSAAK ILSMSGGQYG CPIVFRGPTG NAGQLGAQHS QNFENWFANT PGLKVVVPSN PYDAKGLLKS SIRDNNPVIF MESELMYGDK MAVPEEEYLI PLGKADIKRQ GKDVTIVSFG KMIPRVVMPA VLQLEKEGID VEVIDLRTVR PIDYPAVIES VKKTNRCVVV EEAWPLASIS SEIAYHIQRN AFDYMDAPVI RVTSRDVPLP YAPTLIEEIL PNVKRTIDAV KSVLYK
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