Gene Dfer_3502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3502 
Symbol 
ID8227087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4279181 
End bp4279984 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content53% 
IMG OID644931338 
ProductNAD-dependent glycerol-3-phosphate dehydrogenase domain protein 
Protein accessionYP_003087876 
Protein GI255037255 
COG category[S] Function unknown 
COG ID[COG5495] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.458858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAATCT CCTTCATTGG CGCTGGTAAT GTGGCCTGGC ATCTGGCGCA GGCGTTTGAG 
GATGCGGGGC ATTGGATTTG CGAGGTGTAT AGCCGCGACA CGCAGAAAGC GCGTCAGCTG
GCGTCTTCTT TATATGATAC CAACATCCAG CCCGACCTCA ATTTCTCGGA AAGCGAAGCC
GAACTGATCG TGATCGCCGT TACGGACGAT GCCATTGAAA GCATTATCCA ACGTATTGTG
CTGCCCGAAG GCGTGATCCT CGTCCATACC TCCGGCACGC GCTCGCTCGC TGAATTTCAG
AAACTTGTGG AAATTTACAG CGACGTATAT GTCCACACGG GCGTGTTTTA TCCATTGCAG
ACATTCACCA AAGGCGTCGA AATGGAATAC AGCGAGCTGC CGTTCTGTAT CGAGTCGCGC
AGTGAGCTGA TTGAAGGGAA ACTGATGCAG CTAGCTTCCA GCGTGAGCGA AAATGTGACC
CGCATGGATT CCGACGAGCG CTTCATCCTG CACGTGGCCG CCGTATTTGC GAGCAATTTC
ACCAACTACA TGCTCACCGT TTCGCACGAT CTGCTGGAAC GTGAGCAGAT CAGCTTCGAC
CTGTTAAAAC CGCTCATTCA AACGACGATT TACAAAGCCA TGCTCTCCGA CGATCCGTCC
ATCGGCCAAA CCGGCCCGGC CCGGCGCGGC GATTGGAAAA CCACCGCCCG GCACCTCGAA
TATTTACAGG AAACCAACGA GGATTATACC GAAATCTACC GCCTGCTCAC CGATAAGATC
CGCAACCTCT ACATTTCAAA ATAA
 
Protein sequence
MKISFIGAGN VAWHLAQAFE DAGHWICEVY SRDTQKARQL ASSLYDTNIQ PDLNFSESEA 
ELIVIAVTDD AIESIIQRIV LPEGVILVHT SGTRSLAEFQ KLVEIYSDVY VHTGVFYPLQ
TFTKGVEMEY SELPFCIESR SELIEGKLMQ LASSVSENVT RMDSDERFIL HVAAVFASNF
TNYMLTVSHD LLEREQISFD LLKPLIQTTI YKAMLSDDPS IGQTGPARRG DWKTTARHLE
YLQETNEDYT EIYRLLTDKI RNLYISK