| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3491 |
|---|
| Symbol | |
|---|
| ID | 8227076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 4272075 |
|---|
| End bp | 4272407 |
|---|
| Gene Length | 333 bp |
|---|
| Protein Length | 110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644931328 |
|---|
| Product | large conductance mechanosensitive channel protein |
|---|
| Protein accession | YP_003087866 |
|---|
| Protein GI | 255037245 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1970] Large-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.215655 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCAGG AATTCAAAAC GTTTATCGCA AAGGGCAATG TGCTCGATCT TGCAGTCGGT
GTGGTGATTG GTGCCGCATT CGGAAAAATC ACTACCTCAT TAGTGGAAGA CATTATCAAC
CCGGTTCTCG GGCTCATTAT CGGCGGCGTG GACTTTACGC AGCTTAAAAT CGTATTGAAG
GAAGCCGTAG GCGAAACGCC GGAAGTGGCG ATCAAGTATG GTAACTTTAT CCAGACCATG
ATCCAGTTCC TGATCATTGC ATGGGTGATC TTCCTGATCG TGAAACTGGC CAACCGCCTG
CGTTTGTCGG AATCATTGAA AAAAGAAGAG TAG
|
|---|
| Protein sequence | MLQEFKTFIA KGNVLDLAVG VVIGAAFGKI TTSLVEDIIN PVLGLIIGGV DFTQLKIVLK
EAVGETPEVA IKYGNFIQTM IQFLIIAWVI FLIVKLANRL RLSESLKKEE
|
|---|
| |