| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3487 |
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| Symbol | murC |
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| ID | 8227072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4266824 |
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| End bp | 4268230 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644931324 |
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| Product | UDP-N-acetylmuramate--L-alanine ligase |
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| Protein accession | YP_003087862 |
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| Protein GI | 255037241 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.506219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGTCGT CCTCAGTGAC AAACTGGAAA TATATCTATT TTGTAGGAAT AGGCGGAATC
GGAATGAGCG CGCTTGCCCG GTGGTTTAAA GCCAATGGGT TTGAAGTGGC CGGTTATGAC
AAAACCATGA CCCCGCTCGT GGGCAAGCTC ATCGAAGAGG GCATTCCGGT GACGCTGGAA
GACGATATCT CCACAATCCC CGCGGATTTT AAAGCCGATT CCCAACAGAC GCTCGTCGTG
TACACGCCCG CCGTGCCGGT GCAGCACAAG CAAATGCATT ATTTCCGCGA CGAGAATTTC
ATGATCCTGA AACGCTCGCA GGTGCTCGGC ATATTGACCC AAAACCTGCG GACGATCGGC
GTCGCCGGTA CGCATGGCAA AACGACCACT TCTTCGCTCG TAGCGCACAT CCTCCGCCAC
GCCCATGTGA ACAGCACGGC GTTTTTAGGA GGTATTACGC AAAATTACGG CACCAACCTG
CTGTTGAACG AACCGACGGA CAAGCTGGAA GAGGTCTTTT GCGTGGTAGA AGCCGACGAG
TTCGACCGCT CATTTCTGAC ATTATTCCCC GAAATAGCAA TCGTAACCTC CACCGACGCC
GACCACCTCG ACATTTACGG AAAACACGAA GCCGTGCTCG AATCCTTCCG CGATTATGTG
GGGCAAATTG ACGGGAACGG CGCATTGTTC CTCCGCGACG GCCTGGAAAT AGCGGACAGC
TGCAAGGCAA AAGTATTCAC CTACTCACTG AACAGCGGCC TTTACCATTC CGAAAATATC
CGCATTGAAA ACGCCCGTTT CGTGTTCGAC CTGGTGTATC CGGGTGGCGT GATCGGAGGC
ATTGCGATGA AAATACCGGG TTATCATAAT ATCGAAAACT CCATTGCGGC GAGTGCGGTG
GCATTGTACA TCGGTGTGCA GCCGACGAAG ATCAGGGAGG CGCTGGAAAG CTACGGAGGC
GTGAAGCGCC GTTTCGAATA CCAGTTGGAG GAGAAAGGCA ATGTGTATAT CGACGATTAC
GCGCACCATC CGACGGAAAT AGAGGCATTT TTATCGTCGG TGAAAGGCTT GTACCCGGGC
CGGCATGTGA CGGCGATCTT CCAGCCGCAC CTTTTTACCC GCACGCGCGA CTTTGCAGAT
GGTTTTGCAG AAAGTTTATC GCTTGCCGAC CGTCTTTTAG TGCTCGATAT TTACCCTGCG
CGCGAGCTGC CGATCGGGGG GGTGGATTCG CAGATGATCC TGGACAAAGT GACGGTCGCG
GATAAACAAC TGGTTGCAAA AGAACAAGTT TTACAACTTT TAAAAGAATT AAATACGGAT
ATTGTAGTCA CAATCGGTGC CGGCGACATC GACACTTTGG TGGGCCCGAT TCGCGATTTG
CTGCAAAAGA CGGTTGCGAA TAATTAG
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| Protein sequence | MMSSSVTNWK YIYFVGIGGI GMSALARWFK ANGFEVAGYD KTMTPLVGKL IEEGIPVTLE
DDISTIPADF KADSQQTLVV YTPAVPVQHK QMHYFRDENF MILKRSQVLG ILTQNLRTIG
VAGTHGKTTT SSLVAHILRH AHVNSTAFLG GITQNYGTNL LLNEPTDKLE EVFCVVEADE
FDRSFLTLFP EIAIVTSTDA DHLDIYGKHE AVLESFRDYV GQIDGNGALF LRDGLEIADS
CKAKVFTYSL NSGLYHSENI RIENARFVFD LVYPGGVIGG IAMKIPGYHN IENSIAASAV
ALYIGVQPTK IREALESYGG VKRRFEYQLE EKGNVYIDDY AHHPTEIEAF LSSVKGLYPG
RHVTAIFQPH LFTRTRDFAD GFAESLSLAD RLLVLDIYPA RELPIGGVDS QMILDKVTVA
DKQLVAKEQV LQLLKELNTD IVVTIGAGDI DTLVGPIRDL LQKTVANN
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