Gene Dfer_3482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3482 
Symbol 
ID8227067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4261505 
End bp4262347 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content50% 
IMG OID644931319 
Productacetyl-CoA carboxylase, carboxyl transferase, beta subunit 
Protein accessionYP_003087857 
Protein GI255037236 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00456625 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.454528 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTGGT TTATTCGCAA AGAAAAAGGT ATCAATACAC CGACTGAAAT GAAGCGCGAA 
GCGCCGGACG GTTTGTGGTA TCAATGTCCC AATTGCAAAA AAATCACTCC TACCAGGGAA
CATAAGCAGA ATGCTTTCAC CTGTCCGCAT TGTAATTACC ACGAAAAAGT GGGCTCGGAT
GTGTATTTCA ACCTGCTTTT CGACGACAAC GAGTTCATCG AGCTCGACGA GAACCTCGTT
TCCGGCGACC CGCTCGGTTT TGTAGACACG AAGGCTTATC CCGACCGGAT TAAGTCGACG
ATGAAGAAAA CCGGCTTGAA AGATGCGGTA CGCACCGGCC ATGGTAAAAT GAACGGCCTG
GACCTCGTGA TCGCCTGTAT GGATTTCAGT TTCATCGGCG GATCGATGGG TTCTGTGGTG
GGAGAAAAAA TTGCCCGCGC GATTTCCTAT TCGCTCGAAA AGAAGATTCC TTTCCTGATG
ATTTCGAAGT CGGGAGGAGC GCGGATGATG GAAGCAGGGT TTTCGCTGAT GCAGATGGCT
AAGACCTCGG CACGCCTGGC GCAATTATCC GAGGCCAAAG TACCCTATAT TTCACTGCTA
ACCGACCCTA CAACAGGCGG TGTTACAGCA TCTTACGCCA TGCTGGGCGA CTTTAACATT
TCGGAGCCTG AAGCTTTGAT CGGTTTCGCC GGGCCGCGCG TGATCCGGGA AACGATTGGT
AAGGACCTGC CGAAAGGCTT CCAGAGTGCA GAATTCGTAC TCGAACACGG CTTTCTGGAT
TTCATCGTCG ATCGCAAGGA TTTGAAAGAT AAATTGACAA GCCTGCTGAA TATGCTTAAA
TAG
 
Protein sequence
MSWFIRKEKG INTPTEMKRE APDGLWYQCP NCKKITPTRE HKQNAFTCPH CNYHEKVGSD 
VYFNLLFDDN EFIELDENLV SGDPLGFVDT KAYPDRIKST MKKTGLKDAV RTGHGKMNGL
DLVIACMDFS FIGGSMGSVV GEKIARAISY SLEKKIPFLM ISKSGGARMM EAGFSLMQMA
KTSARLAQLS EAKVPYISLL TDPTTGGVTA SYAMLGDFNI SEPEALIGFA GPRVIRETIG
KDLPKGFQSA EFVLEHGFLD FIVDRKDLKD KLTSLLNMLK