Gene Dfer_3472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3472 
Symbol 
ID8227056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4248592 
End bp4249959 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content52% 
IMG OID644931308 
Producthypothetical protein 
Protein accessionYP_003087847 
Protein GI255037226 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0090694 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.166385 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCAG CACATTCGAT TCCTTCTATT GAAGAACGGT TTGAATTTAC ATCAGGAGCT 
AAGAAAAGTT TGCTCATTGG TGGCGGTGTA GGACTGGCTC TTGTACTATT GGGAGCATAC
CTCGCAGCCA ATGGCGGCGG TGGCCATGAA GTGGCTGCGC ACGGAGCAGA ACATGCTGCG
GCGGCAGGCC ATGCGGCAGC CGAGCACGGA GCAGCTGCGG GACACGGCGC GGCAGAACAC
GGCGCGGCGG CTGGTCACCA TGCCAAGAGC TGGGTTGCCC GCATCTGGGC TAACCTTTGG
GTAAATGGTG TATATTTTAC CGGAATGTCC GTTGTGGGGA TGTTCTTCCT TTCTTATAAC
TACCTGGCGC AAGCCGGTTG GTCGGCGGTA TTCAAAAGAG TACCTGAGGC GCTTCCTGCG
TTCCTTCCTT TCACAGGTGC GGTGTTGCTC ATTACATTCC TGCTGGGCGG GCACGATCTG
TTCCACTGGA CACATAAAGG TCTTTACGAA GTTGGCGGAG CCGAATATGA CAAAATCATT
GCAGGCAAGC AGGGGTATCT CAATACACCT TTCTTCCTGA TCCGTCTGGT AGCGTATTTC
GTGATCTGGT ATCTGCTTTG GAAAAAGATC CGTACGCTTT CGTTGCAGGA AGATGAGATC
GGCGGAACTG AGTTCTACGA AAAATCGATC CGTATCGGAA CTGCGTTCCT GGTAGTGTTC
GGTGTTACTT CTTCTACATC TGCATGGGAC TTCGTGATGT CGATCGACAC ACACTGGTTC
AGCACGATGT TCGGATGGTA CACATTGGCT AGCTGGCACG TGGCTGGTCT GGCGGTGATC
ACCCTTACCA TTGTAATGCT CCGCGAAAGA GGCTACATGA GAGCCGTAAA CGCGAGCCAC
CTGCGCGACC TTGGCAAGTT TGTATTTGCA TTCAGCATCT TCTGGACTTA CGTTTGGTTC
GCACAATTCC TTTTGATCTA TTACGCTAAC CTTCCGGAAG AAACGATCTA CTTCATCGAG
CGTTTCCGCG GACACGGTGG ATTCTATAAG GCGCCCTTCT TCATCACATT GTTCCTGAAC
TTCTTCTTCC CGTTCCTCGT ATTGATGACC CGCGACGCGA AGTTCACACA TTCGATCCTG
AAAGTAGCGT GCTGGAGTGT GATTGTCGGA CACTGGTTCG ATTTCTACAC GAACGTTATG
CCGGGTGCTG TTGGCGCTGG CGCTGAACTT GGACCTTTGG AGTGGGGCTT CTTCCTGATC
TTCCTTTGTG CATTTGCATA CACAATCGCA ATCCAGTTGA CCAAGGCTAA TCTGATCCCG
AGAAATCACC CGATGTTGGA GGAATCACTG CATCACGATA TCGCCTAA
 
Protein sequence
MASAHSIPSI EERFEFTSGA KKSLLIGGGV GLALVLLGAY LAANGGGGHE VAAHGAEHAA 
AAGHAAAEHG AAAGHGAAEH GAAAGHHAKS WVARIWANLW VNGVYFTGMS VVGMFFLSYN
YLAQAGWSAV FKRVPEALPA FLPFTGAVLL ITFLLGGHDL FHWTHKGLYE VGGAEYDKII
AGKQGYLNTP FFLIRLVAYF VIWYLLWKKI RTLSLQEDEI GGTEFYEKSI RIGTAFLVVF
GVTSSTSAWD FVMSIDTHWF STMFGWYTLA SWHVAGLAVI TLTIVMLRER GYMRAVNASH
LRDLGKFVFA FSIFWTYVWF AQFLLIYYAN LPEETIYFIE RFRGHGGFYK APFFITLFLN
FFFPFLVLMT RDAKFTHSIL KVACWSVIVG HWFDFYTNVM PGAVGAGAEL GPLEWGFFLI
FLCAFAYTIA IQLTKANLIP RNHPMLEESL HHDIA