Gene Dfer_3454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3454 
Symbol 
ID8227034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4231379 
End bp4231933 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content44% 
IMG OID644931286 
ProductNusG antitermination factor 
Protein accessionYP_003087829 
Protein GI255037208 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000805693 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0356218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGTC TAAATTGGTT TGTATTAAGA GCAGTGTCGG GACAAGAGAA GAAAATCAAG 
TCTTACATTG AAAATGAAAT CACACGCCAG AAACTAAACG AATTCGTTCC GCAAATCCTG
ATCCCTTCCG AGAAGATTTA TGAAATGCGC AACGGTAAGA AGCGTGTAAG GGAAAAGAAC
TTTTTTCCCG GCTATATTAT CATTTCAGCC GATCTGTCCA AGGGGGAGGT TCTGCACATT
ATTACAAGTA TCCCCGGCGT AATCGGTTTC CTGGGCAATG CCGAAGGAAA CTCCAAAGTG
CCAGTTCCAT TGCGTCAGTC AGAAATTAAC CGCATTCTCG GTAAGGTCGA CGAAGCGGAA
CAGCACGAAG AAGCGCCAAG CATGTCTTTC ATCAAAGGCG AAACCGTGAA AGTGGTGGAT
GGTCCGTTCA GCGGATTCAT CGGTCTGGTG GAAGAAGTGT TCGATGAGAA GAAAAAACTC
AATGTAGTTG TAAAAATATT CGGGCGTAAT ACACCCGTGG AACTCAGTTA CGCACAAGTA
GAAAAGGATA GTTGA
 
Protein sequence
MSSLNWFVLR AVSGQEKKIK SYIENEITRQ KLNEFVPQIL IPSEKIYEMR NGKKRVREKN 
FFPGYIIISA DLSKGEVLHI ITSIPGVIGF LGNAEGNSKV PVPLRQSEIN RILGKVDEAE
QHEEAPSMSF IKGETVKVVD GPFSGFIGLV EEVFDEKKKL NVVVKIFGRN TPVELSYAQV
EKDS