Gene Dfer_3446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3446 
Symbol 
ID8227026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4219491 
End bp4219952 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content56% 
IMG OID644931278 
Product(2Fe-2S)-binding domain protein 
Protein accessionYP_003087821 
Protein GI255037200 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0763161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCAT TCAAACTGAC TATTAACAAC CGTGCATACA GCGCCGATGT GGAGGGAGAT 
ACCCCGCTGC TATGGGTTTT GCGCGATAAT CTGGGCCTCG TAGGTACCAA ATATGGCTGC
GGTATCGCAC AATGCGGGGC CTGCACCGTT CACCTCGACG GCAAGGCCGT TCGCTCATGC
GTACTGCCGG TTTCGGCGGT AGGAAAAGCG AAAGTCACCA CCATTGAAGG CCTGTCCGAA
AAAGGCGATC ACCCGGTACA GAAGGCGTGG GACGAAGTGG ACGTGGCGCA ATGCGGTTAC
TGCCAGGCAG GCCAGATCAT GACCGCCGCC GCATTCCTCA AAGAAAAACC CAAACCAACC
GACGAGGAGA TCGTGGGCGC GATGAGCGGC AACCTTTGCC GCTGCGGCAC TTACCACCGC
ATTCGCGAAG CCGTAAAAGT TGCAGCCTCT AAAACGAATT AA
 
Protein sequence
MASFKLTINN RAYSADVEGD TPLLWVLRDN LGLVGTKYGC GIAQCGACTV HLDGKAVRSC 
VLPVSAVGKA KVTTIEGLSE KGDHPVQKAW DEVDVAQCGY CQAGQIMTAA AFLKEKPKPT
DEEIVGAMSG NLCRCGTYHR IREAVKVAAS KTN