| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3438 |
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| Symbol | |
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| ID | 8227018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4202230 |
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| End bp | 4204548 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644931270 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003087813 |
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| Protein GI | 255037192 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAA TATTGATCAC GATCCTCTTC CTGGCAGCCC AGGCACATCT CGTATTTTCC
CAAAAATTAA CGATAAGCGG AACCGTTCGG GATGCTGCGA ATGGCGAACT TCTTGTGGGG
GCAACTATCG CAGACAGCCT TTCTCAAACA GGCGTACAAA CAAATGCATA CGGTTTTTTC
AGTTTGGAAA TACCCTCACC GGACCATCCC GTCAAAATCA GTTTTGTAGG CTATACGCCG
CTGTATATCA ATAATTTAAC CAAACATAAA TTCCCGCTTG ATATTAAATT GGCGCAGTCC
AATTTGCTCA AAGAAGTGAC GGTAAAAGAA ATAAGAAATT CGGATGCGCT TATCGGGAGT
TTATCCATTC CGATGGACAA AATAAAATCA ATGCCGGCCT TATTGGGTGA GGTGGATGTC
TTAAAAGCGC TGAGCCTTAC ACCGGGTGTT TCGACGGGCA CGGAGGGAAG CGCCGGCTTG
TATATCCGGG GCGGAACGCC CGATCAGAAT TTGATTCTGC TCGATGAAGT TCCCGTATAT
AATGTCACGC ATTTGGGTGG ATTCTTTTCG GTTTTTAATC CTAACTCTTT GAAATCGGTT
GATTTATACA AAAGCGCATT CCCCGCCCGC TATGGCGGCA GGCTTGCTTC GGTAATAGAC
CTGACTATGA AAGACGGAAA TAACCAGAAA TTCGGTGGCG AAGCGGGCAT TGGAATCCTT
AACCAAAGCC TGACATTGGA GGGGCCTATT GTTAAAAACA AAGCCTCGTT TATCGTTTCC
GGGAGAGTTT CCACACTGGG GCTTTCTGCC TTATTGCAGC CCAAAAAACC GAGCGGATAC
GGTGAAACCC GGAAATATCG CTTCTACGAT CTTAATGCGA AACTGAATTA CCAGATCAAT
AAAACGGATC AGATTTATCT GAGCTTTTAT AATGGATTTG ACCGGTTTAC CTACGGTGAA
TGGAGCGCCA ATAGCGGACG GGAAACAGAA ACTTCCCTGG GTAATAATTG GGGAAATACG
ACCGCCACAC TCCGATATAG CAAAGTATTA TCTCAAAAAC TCTTCGCCCG GTTTATTTTG
CTCTATTCAA AATACACCAG TGAATTCAAC AATGAATTCG AGGACATTAA CCCGAACAGG
GACCCGGTCA GGCTCTATCG AAATACCAAT GCAGGAGTAA CGGATTTAGG CAGTAAAATT
CAGTTTGACT ATTTCGCTTC CAATCGGGTA AATCTGCAAT TCGGTCTGGA TGCTACAAGG
CATTCATTTA GTCCGTTTGT TACAAAAAGC AATTACAGTG GCTCACAGGA AAGTAGCGGA
GCAGGTAAGC TACCGGCAAC GCAGCTGGAT TTTTACGCGG ATGCCGATAT TAATCTTACT
TCTAATTTAC GCTTCAATCC CGGCTTCCGG TATAGTTTGT ATAATGTGAA TAACCAAACT
TTTTGGAATC CTGAACCGCG CCTGGGGTTG AACTGGTCGC TTCCGGCAAA TTGGGCTTTG
AAGGGTGGCT ATGCAATTAT GAATCAATAT GTTCACCTGC TTACCAACAA TGGTTTCGGT
TTCGGTTATG ACGCGTGGCT GCCTTCCACG GACAAGGTAA CGCCTTCACG AAGCGCACAG
ATTTCCATCG GATTATATAA AACTTTTCCC CGGCAAGGCC TGGAATTTTC ACTGGAAGGG
TATTCAAAAA GGATGAAAAA CCTGATCGAT TATCCCGACG GAACCAATTT CACGGGCTTA
CTTGCAGAGT CATGGGATGA TATTGTCATC AAAAATGGCG CAGGACGCGT ACAGGGAATT
GAAATGATGC TAAGCAAAAC GACGGGACGT TTCAATGGCT GGATTTCATA TACTTTATCC
AAATCAGAAA GAAAATTCAC AGAAATTAAC GACGGTGCAT GGTTCCCGAT GAAATATGAC
AGGCGACATC ATATAGCGGC GACGGCCAAC TACGAAATCG GTAAGAAATG GAAATTAAGC
GCCAGCTTTG TTTACCAGAC AGGCCATGCT GTTACTTTGC CCGAAGGTGC CCTGATAACT
GAAAATAGTG GCGGCCCAAG ATTTATTTAT GACAAGCGAA ACAACGGACG AATGCCCGCA
TTTCACCGCC TCGACATTGG CGCAAGCAAA TCGCTGATAA CTCCCGGCAA ACGAAAAGCG
GAACTACGGT TTGGTTTATA CAATGTCTAC AACCGAAATA ATCCGCTTTA TCTGGATATG
AAGACAGAAC GAAAGAATTA CACACCGACG GCAATTTCCA TTAAGCAGGT TTCATTTTTC
CCGATTTTGC CATACATAGG TTACACATTG AAATTTTAA
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| Protein sequence | MMKILITILF LAAQAHLVFS QKLTISGTVR DAANGELLVG ATIADSLSQT GVQTNAYGFF
SLEIPSPDHP VKISFVGYTP LYINNLTKHK FPLDIKLAQS NLLKEVTVKE IRNSDALIGS
LSIPMDKIKS MPALLGEVDV LKALSLTPGV STGTEGSAGL YIRGGTPDQN LILLDEVPVY
NVTHLGGFFS VFNPNSLKSV DLYKSAFPAR YGGRLASVID LTMKDGNNQK FGGEAGIGIL
NQSLTLEGPI VKNKASFIVS GRVSTLGLSA LLQPKKPSGY GETRKYRFYD LNAKLNYQIN
KTDQIYLSFY NGFDRFTYGE WSANSGRETE TSLGNNWGNT TATLRYSKVL SQKLFARFIL
LYSKYTSEFN NEFEDINPNR DPVRLYRNTN AGVTDLGSKI QFDYFASNRV NLQFGLDATR
HSFSPFVTKS NYSGSQESSG AGKLPATQLD FYADADINLT SNLRFNPGFR YSLYNVNNQT
FWNPEPRLGL NWSLPANWAL KGGYAIMNQY VHLLTNNGFG FGYDAWLPST DKVTPSRSAQ
ISIGLYKTFP RQGLEFSLEG YSKRMKNLID YPDGTNFTGL LAESWDDIVI KNGAGRVQGI
EMMLSKTTGR FNGWISYTLS KSERKFTEIN DGAWFPMKYD RRHHIAATAN YEIGKKWKLS
ASFVYQTGHA VTLPEGALIT ENSGGPRFIY DKRNNGRMPA FHRLDIGASK SLITPGKRKA
ELRFGLYNVY NRNNPLYLDM KTERKNYTPT AISIKQVSFF PILPYIGYTL KF
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