| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3435 |
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| Symbol | |
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| ID | 8227015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4199270 |
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| End bp | 4200139 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644931267 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003087810 |
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| Protein GI | 255037189 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGAA GAGACTTTTT AAAGAAATCC GGTTTTTTAA CGGCTGGGGC ATTGTCGGTT
AGTTCTTTGA GCGCAATTGC CGCCGCTCCG AAGAAAGTGA TCGATCCTTT TGGTGTTCAG
CTGTTCAGTG TGCGCAGTCT GCTGCCGGAT GATCCCAAAG GCGTCATGAC CAAGCTGGCC
GAAATGGGTT ATAAGCAGTT TGAAAGCTTT CAAGGCCCGA AGGGGTTCCT GTGGGGCATG
GAGCCGAAGG AAATCAAGAG TTTTCTCGAT GGCCTGGGCG TGAAAATGGT GAGTACGCAC
TTTGATTTCA AAGGCGCTGC CGCAGATCCT GAAAAGCTGA AACAATACAT CGATATGGCG
CAGGGCGCTG GCTTGAAATA CATGATCTGC CCGTGGATCG GCCCGCAAAA GACCTGGGAC
GAGTGGAAGG TCGTAGCGGA CGACTTCAAC AAGGTAGGCG AGCAGGTCAC AAAATCGGGC
CTGAAATTCG GCTACCATAA CCACGATTAT TCATTCAAAC CACTCGATGG AAAACTTCCG
CAAGACTATT TGCTAGAAAA TACCAATCCG AAAAACGTCA TGTTCGAACT CGATCTTTGC
TGGATCGACG TGACAGGCGT TTCCACGGCC GACCACCTCA AAAAGTACGG CAAGCGCTAC
GAGCTTTGCC ACGTGAAAGA TTACACCAAA GAAAACGGCA AGCCGGTACA AAACGACCTG
GGTAAAGGTA GCGTCGATTT CAAAAAGACG CTTCGCCTGG CCATGGACAG CGGTATCAAA
TACTTTTTGG TAGAGCAGGA AGAATATCCC GAGTCGCCGC TGGTCAGCCT GGCCAACGAC
GCGCAGTATA TGAAAAAGCT CTCAGTGTAA
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| Protein sequence | MERRDFLKKS GFLTAGALSV SSLSAIAAAP KKVIDPFGVQ LFSVRSLLPD DPKGVMTKLA
EMGYKQFESF QGPKGFLWGM EPKEIKSFLD GLGVKMVSTH FDFKGAAADP EKLKQYIDMA
QGAGLKYMIC PWIGPQKTWD EWKVVADDFN KVGEQVTKSG LKFGYHNHDY SFKPLDGKLP
QDYLLENTNP KNVMFELDLC WIDVTGVSTA DHLKKYGKRY ELCHVKDYTK ENGKPVQNDL
GKGSVDFKKT LRLAMDSGIK YFLVEQEEYP ESPLVSLAND AQYMKKLSV
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