Gene Dfer_3434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3434 
Symbol 
ID8227014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4198693 
End bp4199196 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content51% 
IMG OID644931266 
Productcupin 2, conserved barrel 
Protein accessionYP_003087809 
Protein GI255037188 
COG category[S] Function unknown 
COG ID[COG4297] Uncharacterized protein containing double-stranded beta helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGA ATTTCGAGGT CGAGAAATAT TGGTTTGAGG ATGATGGCGT GATACCGAAC 
AATGCATTGC CTGTCCTTGT CTACCGCCAA ATCTGCGCAG TGGATGATAA GTCGGAGTGG
TTCGAAACCA CTTTTATCGC TAACGGATGG ACAAATAACT GGCGGGATAC TATTCTTCCC
TACGATCACT TCCATAGCAC CACACATGAA GTACTGGGTG TGGGCAAGGG TGATGTTATG
CTGCATGTGG GAGGTCGGTT CGGTAAACAG CTGTTCCTCA ATGCAGGCGA TGCAATCATA
CTCCCGGCAG GCGTTGGTCA CTACGCATTG CCAACGAAAA ATGAATATGA AATCGTTGGC
GGTTACCCCG AAGGCAGGGC TTGGGACCTT CTGACAGGCG AAGAAGGTGA GCGGGAAAGG
GCGCTGATCG GCATTAAGAA TGTGCCTGTG CCCTTCACAG ATCCCATTGA TGGTGAGCAC
GGGACTTTGA TCAGCTCCTG GTAA
 
Protein sequence
MPKNFEVEKY WFEDDGVIPN NALPVLVYRQ ICAVDDKSEW FETTFIANGW TNNWRDTILP 
YDHFHSTTHE VLGVGKGDVM LHVGGRFGKQ LFLNAGDAII LPAGVGHYAL PTKNEYEIVG
GYPEGRAWDL LTGEEGERER ALIGIKNVPV PFTDPIDGEH GTLISSW