Gene Dfer_3432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3432 
Symbol 
ID8227012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4197067 
End bp4197816 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content48% 
IMG OID644931264 
Producttranscriptional regulator, DeoR family 
Protein accessionYP_003087807 
Protein GI255037186 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAAAG AAGCCCGCTT TGAACATATT TTGGATAAGT TGAAGGCGAA CAGCCGGGTG 
TTTTTTGAAG AACTGGCCAA CGACTTGAAA GTCTCTGAGG ACACCATCCG ACGGGATATA
GATATCCTGG CAAAGAGCGG CCTGATGGTC AAGGTGCGTG GGGGAGCTAT TTCACCGGCC
CATAACCCGC TGACATTCCA GCAACGTGCA GGAATGTTTA CCGAGGCAAA GCAGCGCATA
GGACTTAAAG TACAACAACA TCTTGCCGAC GTCAAAACGG TGCTGATGGA TGGCGGTACT
ACGATGCTGG CTGTTGCGGC ATCGATTCCG GTTAATGCCA AGTTGAGGGT TATTACCAAT
AACGTCGCGC TACCTCATGT GCTATCCAAT CATTCGGGGA TAGAAATCGT GTTGCTGGGG
GGTAACTACG TGCCAGGGAC CCAGACAACG GTAGGTGTCC AAACATGCAT GGAAGCACGA
AAATACGTCG CGGATCTTTA CCTGATGGGG ACCTGTGCCA TTGATGTAAG CATTGGTGTG
ACGGCTCAGT TTGCAGATGA CGGTGAAGTA AAAAAAGTAT TTATTGAATC TTCAAGAAAA
ACGATTGCCC TGGTCAGTCA AGAAAAGCTC AACATGATAG ATTACTTCAA AGTAGCCGAA
TTGAATGAAG TCGATGCCAT CATCACAGAT TTAGTTAGTG ACGACGACCA ACTGGCAAAG
TACCGGTTCT CGGGCTTGGA GATCTATTAA
 
Protein sequence
MLKEARFEHI LDKLKANSRV FFEELANDLK VSEDTIRRDI DILAKSGLMV KVRGGAISPA 
HNPLTFQQRA GMFTEAKQRI GLKVQQHLAD VKTVLMDGGT TMLAVAASIP VNAKLRVITN
NVALPHVLSN HSGIEIVLLG GNYVPGTQTT VGVQTCMEAR KYVADLYLMG TCAIDVSIGV
TAQFADDGEV KKVFIESSRK TIALVSQEKL NMIDYFKVAE LNEVDAIITD LVSDDDQLAK
YRFSGLEIY