| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3421 |
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| Symbol | |
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| ID | 8227000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4181559 |
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| End bp | 4182821 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644931252 |
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| Product | ornithine aminotransferase |
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| Protein accession | YP_003087796 |
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| Protein GI | 255037175 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR01885] ornithine aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00000373729 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGACT ATACAGACAC AACCGATATC AGCCCCTCCC AACACGCCAT AGACCTCGAA
TACCGCTACG GTGCGCATAA CTACAAACCG ATGCCGGTAG TGATCGAGCG GGGGGAAGGA
GTTTTTTTGT GGGATGTGGA AGGGAAGCAG TATTTCGACT TTCTCTCGGC GTATAGTGCG
GTGAGCCAGG GGCATTGCCA TCCGAAAATC GTGAATGCGA TGATCCAACA GGCACAGAAG
CTGACGCTCA CTTCGCGGGC ATTTTACAAC GACCGCTTAG GCGAATCCGA GAAGTTCCTG
TGCGAATATT TCGGGTACGA TAAGGTGCTG ATGATGAATT CCGGCGTGGA AGGCGGTGAA
ACGGCATTGA AACTGACCCG CAAATGGGCG TATAAAGTAA AGGGTATCGA ACCCGGAAAG
GCCAAGACAG TGTACGCGGC CGGTAATTTC TGGGGTAGGA CACTGGCGGC GATTTCTTCG
TCCACAGATC CTTCTTCCAC CAACGACTAC GGCCCCTTCC TGCCCGGCTA CGAGATCATT
CCCTACAACG ACCTCGGCGC ACTCGAAAAC CTGCTGAAAA GCGATCCGAA TATCGCCGGT
TTTATGGTAG AGCCCATTCA GGGTGAAGCG GGCGTGGTGG TGCCGGACGC GGGTTACCTG
AAAGGCGTGC GGGAGTTGTG TACAAAATAC AATGTCCTTT TTATCGCCGA CGAGGTGCAA
ACCGGCATCG GGCGCACGGG CAAGCGCCTG GCGTGCGACT GGGAGGGCGT GAAACCCGAT
ATTCTCGTAC TCGGAAAAGC ATTGTCGGGC GGTACCATGC CCGTTTCGGC TGCGCTTGCC
GACGACGAGG TGATGCTCAC GATCGCTCCG GGCGAGCACG GTTCTACCTA CGGCGGAAAC
CCGCTGGCGT GCGCGGTGAC GATTGCTGCC TTGCAGGTGG TGCAGGACGA AAACCTGGCC
GAAAATGCCG AACAAATGGG CCGGATCTTC CGGCACAGAA TGCAGGATCT TCAAAAGCAA
TGTTCTCTCA TCGAAAGCGT TAGAGGGAAG GGGCTGCTCA ATGCGATCGT GATCGACGAC
ACCGAGGAAA GCAGCACAGC AATGGACCTT TGCTACAAAA TGATGGAAAA AGGATTGTTG
TGCAAGCCTA CACATGGCAA TAAAATCCGC TTCGCGCCGC CGTTGGTGAT CGATGAGGCG
CAAATGGACC ATGCCTGCCG GATCATTGAA GAGGTGTTTT TAGAAATGAA TGGAGATTTA
TGA
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| Protein sequence | MPDYTDTTDI SPSQHAIDLE YRYGAHNYKP MPVVIERGEG VFLWDVEGKQ YFDFLSAYSA
VSQGHCHPKI VNAMIQQAQK LTLTSRAFYN DRLGESEKFL CEYFGYDKVL MMNSGVEGGE
TALKLTRKWA YKVKGIEPGK AKTVYAAGNF WGRTLAAISS STDPSSTNDY GPFLPGYEII
PYNDLGALEN LLKSDPNIAG FMVEPIQGEA GVVVPDAGYL KGVRELCTKY NVLFIADEVQ
TGIGRTGKRL ACDWEGVKPD ILVLGKALSG GTMPVSAALA DDEVMLTIAP GEHGSTYGGN
PLACAVTIAA LQVVQDENLA ENAEQMGRIF RHRMQDLQKQ CSLIESVRGK GLLNAIVIDD
TEESSTAMDL CYKMMEKGLL CKPTHGNKIR FAPPLVIDEA QMDHACRIIE EVFLEMNGDL
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