| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3418 |
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| Symbol | |
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| ID | 8226997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4175328 |
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| End bp | 4178426 |
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| Gene Length | 3099 bp |
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| Protein Length | 1032 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644931249 |
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| Product | SMC domain protein |
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| Protein accession | YP_003087793 |
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| Protein GI | 255037172 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.157497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCCA AGCGCTTAAA AATAAAAGGA CTTTACTCTT ACCAGACCGA GCAGGAAATT
GATTTCGATC CATTGACGGA CGCATCCCTG TTTGGCATCT TCGGCTCGGT GGGAAGCGGG
AAATCGTCCA TTCTCGAAGC AATCACATTT GCATTGTACG GCGATACAGA GCGGCTCAAC
AAATCGGGCG ACGACCGGAC GTACAACATG ATGAACCTGC GGTCGGACGA TCTGCTGATC
GATTTTGAAT GCATTGCAGG CAAAAATGCG GACCGTTACC GGTTTACCGT GCGCGGAAAA
CGGAACAGCA AGAATTTCAA GGATGTAAAG ACATTTGAAA GAAAGGGCTA CATATGGCAG
GAAGAGGACT GGGTGCCGCT CGCGGAAAAT GAATCGACCG AAAGCATTAT CGGCCTCAGT
TATGACAACT TCCGCCGGAC CATCATCATC CCGCAAGGCC GCTTCCAGGA ATTCATCGAG
CTGAAAGACG CCGAGCGGAC GCGGATGATG AAAGAGCTTT TCCAGCTCGA AAAATACGAC
CTCAGCCGCA ATGTGGGTTC GCTGAGTAAC CGCAATAACC TGGCATTGTC CAATGTGGAC
GGCCAGTTAA TGGGCCTCGG CGAAGTAACG CAGGAAATGC TTGCCGAAAG CGAACAGCGG
TTGGAGCAGA TCAGGCTGCA AATTCAGCAG GTTAGCGCCG AACTGAACGT GCAGACGGAG
CTGGAAAGTA ATTTGCAAAA GCTCAAACTC GCAGGCGAAA AGACCCAAAT GCTCCAAAAC
CGGCTCGCTA CGCTGGATTC CCAACGAGCG GCAATGCAGG AACGCGAGGC GGCATTAAAG
ACTTTTGAAA CCTGTTCCCT GCATTTTAAA TCGATTTTTG ACCAGAAAAA CAACCTGCTG
ACAGCCATCG CACGCGACGA ACGCATTTCA TCCGCGAACC AGGCGAAGCT GACCGAACTG
GCCGCTTTAC TCGAAAAGCA GCAGGAGACA TTGCAAATGC TTAAACCGCG CTTTGAAAAG
CGCGAGGAAC TGCTCGCCAC CGCCGAGGAA TTGGAAAAGG TCATCCGCAT TATCGAACAT
TCACAATCGG TTATCAAACG GAAAGACGCA TTACAGCGGG GTGAGGAGCA TTTGAAGGAA
CGGGAAAACG CTATTGAGCT GCAAAAACAA CAAAAGCAGG AGCTGGAAGC CGCAAACGAA
CAACGCAAGG CCGGACTGGG CGACGTGCTC GAAATGGGGC TGGTGAAGTC GTGGTTTGTG
AAAACAGACG ATCTGATGGC GGATCGCCAG TCGATCAAAA CAGAGGCGGA GACGCTTGCG
GCGGAGATCA AAACGCTGAC GGAAGGCCTC ACGCAGCGCT TGCAGGAGAT TACCGGCGAA
TTCGGAATTC CGTTTGATGG TGAAATGCTG TTGGAAAATT TTCAAAAGCG CATTACTAGT
TATTTGGAGA CTTGTGAAAC TGACCGGAGG GAATTGAACC GGCAGTTGTT GCATATCAAT
ACCCGCGTTG CCTTGCATCG ATATGCGGGT AACCTGGAAG ACGGAGCCCC CTGCCCGCTC
TGTGGCTCGC TGCATCATCC CGAGGTGCTC ATCGCCGACG GTGCATTGTC CGCGGAAACA
GCGGCGATCG AGAAGCGGTT GAATGCATTG GACGAAAAAG AGCGGTTGCT GAGGAAGCTG
CAATCGCCGA TCGAGCGTGT TTTTAACCAG ATCGAAAATC TTGAGAGACA GAAAACATCG
ATCAAACAAC GCTATGCCGA CGCGCAGGCG AAATTAAAGG CCCACGATGA AGGATTTGCG
TGGCCAGCAT TCAACAAAGC CGATCGCGAG GGTTTCGACA AACGTTTCGC GGAAAGCAGC
CGCGTGCAGG GCGAAATCAA GGCAGGAGAA ACGATTTTAA AAGGTTTAAC GGCGCAAATA
GAAGCTGCAT TGACCGAAAA AGCCGAGAAA ATCGAAAAGC CGCTCCAAGT GTTGAAAGAT
GAGATCTTAA GATTTGAAAA TACCGTACAA ACGCTTTCGG AGCAGCTGTC GAGGGTGAGC
CTGGCGGATT TCGCAAATGC CGACAAGGCG GATATTTCAC TCAAAATCAA TGCATTAAGA
ACCGATTACA CGCAGCTCTC GGCGGCATTC GCGGACGCTG AAAAGCAGGC CGACGCGCTG
GAAAAAGAGC GGAATACGCT TTCAGGCAGC CAGGCTGCAA TGCTTACCGC ATTGGAAGGA
AACCGGGCCG AACTGGTGGC CGTGCAGGTA AAAATTGATG AACAACTGAC CGCCTACGCA
TTCGAATCGG AGGCGCAGGT GGCGGAAATA TTGCAAAAGC CGCTCCGGAT CGAAACCGAA
CGGCAGGCGA TCGACGAGTT CAGACTGGCA TTGGAAACGA CGAATGCCGA GCTGAAAAAC
ATGCTGGAAG ACCATGCCGG CGAACAATAC GACGCGGCCA GGCACGAGGA AGTTATCGCA
TTAAAAATTG CATTGACCGA AAACCTGAAT GCGCAGCGGA AAGAGGAAGG CAATATTGGC
GGCAGGCTGA AACAAATGGC GGAGGACCTG GCTAAAAAAG CGGCATTACT TGCCGAAAAA
GCCCGTTTGC AGCTCAGGAA GGAACATCTG GACGATCTGG CGAAGCTCTT CCGGTCCAGC
GGTTTTGTGG ATTATGCATC GAGCATTTAT CTGCAAAACC TCATCCAGGC CGCCAACCAC
CGTTTCCATC AGATGACCCA CCAGCAGCTG CACCTCGAAC TTGGCGAAGG TAACAGCTTT
TGGGTCAGGG ACTTGCTCAA CGGCGGACAC ATGCGGCTGC TGAAAACGCT TTCCGGCGGG
CAGAAATTCC AGGCTGCACT GTCGCTCGCG CTGGCGCTGG CCGACCATAT TCACGTCAGA
AACGAGTCGA AACACAACTT CTTTTTCCTG GACGAGGGTT TTGGATCGCT GGACAAAAAC
GCATTGCAAA CCGTTTTCGA AACGCTCAAA TCGCTGAGAA AGGAGAACCG AATCGTGGGG
ATCATCAGTC ACGTGGAGGA CCTGCAACAG GAGATCCAGA CGTACCTGCG CATTACCGAA
AGCGAAGAAG GCAGCCGGAT CGTACCGAGC TGGAAATGA
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| Protein sequence | MIPKRLKIKG LYSYQTEQEI DFDPLTDASL FGIFGSVGSG KSSILEAITF ALYGDTERLN
KSGDDRTYNM MNLRSDDLLI DFECIAGKNA DRYRFTVRGK RNSKNFKDVK TFERKGYIWQ
EEDWVPLAEN ESTESIIGLS YDNFRRTIII PQGRFQEFIE LKDAERTRMM KELFQLEKYD
LSRNVGSLSN RNNLALSNVD GQLMGLGEVT QEMLAESEQR LEQIRLQIQQ VSAELNVQTE
LESNLQKLKL AGEKTQMLQN RLATLDSQRA AMQEREAALK TFETCSLHFK SIFDQKNNLL
TAIARDERIS SANQAKLTEL AALLEKQQET LQMLKPRFEK REELLATAEE LEKVIRIIEH
SQSVIKRKDA LQRGEEHLKE RENAIELQKQ QKQELEAANE QRKAGLGDVL EMGLVKSWFV
KTDDLMADRQ SIKTEAETLA AEIKTLTEGL TQRLQEITGE FGIPFDGEML LENFQKRITS
YLETCETDRR ELNRQLLHIN TRVALHRYAG NLEDGAPCPL CGSLHHPEVL IADGALSAET
AAIEKRLNAL DEKERLLRKL QSPIERVFNQ IENLERQKTS IKQRYADAQA KLKAHDEGFA
WPAFNKADRE GFDKRFAESS RVQGEIKAGE TILKGLTAQI EAALTEKAEK IEKPLQVLKD
EILRFENTVQ TLSEQLSRVS LADFANADKA DISLKINALR TDYTQLSAAF ADAEKQADAL
EKERNTLSGS QAAMLTALEG NRAELVAVQV KIDEQLTAYA FESEAQVAEI LQKPLRIETE
RQAIDEFRLA LETTNAELKN MLEDHAGEQY DAARHEEVIA LKIALTENLN AQRKEEGNIG
GRLKQMAEDL AKKAALLAEK ARLQLRKEHL DDLAKLFRSS GFVDYASSIY LQNLIQAANH
RFHQMTHQQL HLELGEGNSF WVRDLLNGGH MRLLKTLSGG QKFQAALSLA LALADHIHVR
NESKHNFFFL DEGFGSLDKN ALQTVFETLK SLRKENRIVG IISHVEDLQQ EIQTYLRITE
SEEGSRIVPS WK
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