| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3411 |
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| Symbol | |
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| ID | 8226990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4168818 |
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| End bp | 4169657 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644931242 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003087786 |
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| Protein GI | 255037165 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.528126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTGA AACTCAATGG GAAAACTGCA TTCATCAGCG GTTCGACACA GGGTATCGGC
TTTGCCATCG CGCAGAGTCT CTTGAAAGAA GGTGCCCGTG TGATCATCAA CGGCCGCACC
GAAAGTAAGG TAGCGGAAGC GGTCCAAAAA CTGAATGAAT CGACGCCGGG CGGGGGGCCG
CCCAGCGGGA TGCCGCCCAG CGGGATGCCG CCCGGCGGGA ATGCGAGAGG TTTTGCTGCC
GATTTTTCGA AGGTCGATGA AGTAAATGCA TTGCTGCAAC AGCTGCCGGA CATTGATATC
CTAATCAATA ATGCCGGTAT TTTCGAACCG AAGCCGTTTA CCGAGATCTC GGACGAGGAA
TGGTTCCGGT TTTTTGAAGT GAATGTGCTT AGCGGCGTAC GTCTGGCGAG GTATTTCTTT
CCAAAGATGA TCGCGAAAGA TTGGGGCCGG ATCATCTTCA TTTCCAGCGA ATCGGCGGTG
AATATCCCGG AAGAAATGAT CCACTATGGC ACCACCAAAA CCGCTCAACT CGCCGTGAGC
CGCGGGCTGG CCGAACTTAC AAAAGGCACC AACGTAACAG TGAACACAGT TATGCCCGGC
CCAACCAAAT CGGAAGGTGT GGCCGACTTT GTGAGGCAGC TGGGTGAGGC CAACAATATG
TCCGCAGAGG AAGCCGAGAA GGATTTCTTC AAAAATGCAC GGCCCACCTC GCTGCTGCAA
CGTTTCGCGT CAGTGGAAGA GATCGCTAAC CTCGTTACTT ACGTGGCGAG CCCGCTTTCG
TCAGGTACTA ATGGCTCGGC GCTGAAAGTG GACGGCGGCG TGGCGAAGTT CATCATCTGA
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| Protein sequence | MDLKLNGKTA FISGSTQGIG FAIAQSLLKE GARVIINGRT ESKVAEAVQK LNESTPGGGP
PSGMPPSGMP PGGNARGFAA DFSKVDEVNA LLQQLPDIDI LINNAGIFEP KPFTEISDEE
WFRFFEVNVL SGVRLARYFF PKMIAKDWGR IIFISSESAV NIPEEMIHYG TTKTAQLAVS
RGLAELTKGT NVTVNTVMPG PTKSEGVADF VRQLGEANNM SAEEAEKDFF KNARPTSLLQ
RFASVEEIAN LVTYVASPLS SGTNGSALKV DGGVAKFII
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