Gene Dfer_3409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3409 
Symbol 
ID8226988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4167105 
End bp4168106 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content57% 
IMG OID644931240 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_003087784 
Protein GI255037163 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.149484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGGGT TAGTTACAGA AATAGCAAAT AAATCAGGTA TAGTAAAAAT CTACAAGCAA 
GGTGCGCCCT CGGTATTGGG TTATGAAAGG GAAACAATGA CCGAGCCTGG CCCCGGACAG
GTGCGCATTC GCCAGGAGGC GATCGGGCTG AATTTTGTGG ATACCTATTA CCGCGACGGC
AAGTTTCCCG TCAGATCCTT TCCTTACACG CCGGGCGTGG AGGCGGCAGG CATCATCGAG
GCCGTGGGCC CGTGGGTGAC TGAATTCCAT GTCGGCGATC GTGTGGGATA TCACTTCATT
CCCGGTGCGT ATGCGGAAAG CCGCGTGGTG TCCACGCAGC AGCTGGTCCA TATTCCGGAT
ACCATGTCGT CGGAAGAGGC GGCGGCGCTC CTGGTGAAAG GATTTACGGC GCGCATGCTG
GTTAAAGAAG TTCATCCGGT AAAGCCCGGC GACGTTGTGC TGGTGCATGC GGCGGCCGGA
GGCGTGGGTG CGCTCGTGAC CAAATGGGCG AAAGCACTCG GCGCGACGGT AATCGGCACC
ACCGGCTCGG AAGAGAAGAA GAAAGTGGTG CTCGCCAACG GGGCGGATTA CGTTTTCCTG
GCCGAATGCC GCGAATTTGT ACACTCCGTG CTGGAAATTA CCGGCGGCCG GGGCGTGGAT
GTGGTGTTTG ATGGGGTGGG AAAAGACACT TTCGCACATT CGCTGGAACT GATCGGCAAA
GGCGGGAAGA TCGTGCTTTA TGGTTCATCC TCCGGTCAGC CCGAGCATAT CGATCATGCG
CTGCTGCGCG AAAGATCCAT TATTATGGCA ACGCCCACGC TCAGCGCTTA CATCTCGGAT
CGCGATGCGC TCGACGCGTA CGCAGCCGAT ACTTTCGAGG CATTTCACAA CGGAATTTTT
GGGAAACTTG CCATTACGCG CTATCCGCTA TCGATGGCCG GCCAGGCGCA GGCCGACCTC
GAAGCCCGAA AAACAATTGG TTCCGTAATT TTGGTGCCGT AA
 
Protein sequence
MSGLVTEIAN KSGIVKIYKQ GAPSVLGYER ETMTEPGPGQ VRIRQEAIGL NFVDTYYRDG 
KFPVRSFPYT PGVEAAGIIE AVGPWVTEFH VGDRVGYHFI PGAYAESRVV STQQLVHIPD
TMSSEEAAAL LVKGFTARML VKEVHPVKPG DVVLVHAAAG GVGALVTKWA KALGATVIGT
TGSEEKKKVV LANGADYVFL AECREFVHSV LEITGGRGVD VVFDGVGKDT FAHSLELIGK
GGKIVLYGSS SGQPEHIDHA LLRERSIIMA TPTLSAYISD RDALDAYAAD TFEAFHNGIF
GKLAITRYPL SMAGQAQADL EARKTIGSVI LVP