Gene Dfer_3408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3408 
Symbol 
ID8226987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4166492 
End bp4167082 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content52% 
IMG OID644931239 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_003087783 
Protein GI255037162 
COG category[R] General function prediction only 
COG ID[COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.577777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAG TCCTTATTCA GTTTGCTCAT CCGAGACTCA GTAAATCCAA TGTGCAGAAA 
ACGTTGGAAC AATATGCCCG TAAGGTGAAG GGCGTGACAT TCAACGACCT CTACGAGCAT
TATCCCGATC TGTTCATTGA TGTAAAAAGA GAGCAGCAGC TGCTGGCGAA GCACGATATC
GTCGTATTTC AGCATCCGTT CTATTGGTAC AGCAGCCCGC CGGTCCTGAA ACAATGGCAG
GACCTCGTGT TGGAATACAA CTGGGCTTAC GGTCCGAAGG GATACGCATT GCAGGGCAAA
AAGGTGTTCA ACGCCGTCTC CTGCGGGGGC GGGCGCGACG CTTATTCCGA AACGGGCTAC
AACCGGTTCC CGCTGGGGCA ATACCTGCTG CCGTTCGATC AGACGGCTCA TTTGTGCCGG
ATGGAATACC TGCCGCCGTT TGTCGTGCAT GAAACCTACA CCATCGAAGA CTATGCGCTC
AAAACTTTCG GCGAACAATA TGCCGAACTG CTCGATGCGC TGGTGAACGA CCGGATCAGT
GCCGGGGCGC TTTCGGGAGT AGAATATTTA AATGAACTTT TTCCACACTA A
 
Protein sequence
MTKVLIQFAH PRLSKSNVQK TLEQYARKVK GVTFNDLYEH YPDLFIDVKR EQQLLAKHDI 
VVFQHPFYWY SSPPVLKQWQ DLVLEYNWAY GPKGYALQGK KVFNAVSCGG GRDAYSETGY
NRFPLGQYLL PFDQTAHLCR MEYLPPFVVH ETYTIEDYAL KTFGEQYAEL LDALVNDRIS
AGALSGVEYL NELFPH