Gene Dfer_3396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3396 
Symbol 
ID8226975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4152174 
End bp4153034 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content51% 
IMG OID644931227 
ProductGumN family protein 
Protein accessionYP_003087771 
Protein GI255037150 
COG category[S] Function unknown 
COG ID[COG3735] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGGG TTTTGTTTTT GCTGATTTTT TGTGCGTTTA CAATTGCTTC GCGGGCACAG 
GTGCCGGTGG AGAATTCTTT GCTTTGGGAA ATCAGCGGCC GCGGGCTGGC TAAACCTTCG
TATTTGTTTG GCACGATCCA CCTCATTTGC CCCACCGATT TCTCGATCAG CGACTCCCTG
AAAAGCACCC TCGCGCGCAC CCAGCAGGTG GCGCTCGAAA TGGATATGGA CGACCCGGGT
ATGATGACCG GGATGATGAA AACAATGAAT ATGACCGACG GTAACGAGTT AAAAAAGCTC
GTTACCGCGT CGGAATACGA GCGGCTGAAC CGCTTTTTTA CGGATTCTGT GCACGTAGGT
CTGGCGATGT TCGAACGGGC CAAACCATTT ATTCTGATGG GCCCGCTCTT CAATGCATTG
CTCGACTGCC AGCCGCAATC CTACGAAATG GCACTTGTGG AGCTCGCCGG CAAGCAGAAG
TCCGAGGTGA TCGGCATTGA AACGCTGGAA GAACAAATGG CTATTTTCGA CACGATTCCT
TACAAAGATC AGGCAAAAAT GCTGCTCACC CTGATCGACA GTTTACCTTC CGCCAAAAAA
GAATTCCGGA GCCTGGTTGC ATTGTACAAA ATGCAGGACA TCAGCAAGCT GTACGATTTG
ACGATGAAAA GTGATTTTGG AATGGACGGC AATGAAGAAG TAATGCTGTT TGCCCGCAAC
CAAAAATGGA TCCCCCGCAT CCGTCGTATC GCCAGTGCGA AGCCAACATT TTTCGCCGTC
GGTGCTGCGC ATTTGGGAGG GGAACGCGGT GTGATCGCCT TGCTGAGGAA AGAAGGCTTC
CAGGTTCGAG CGGTCAAGTA A
 
Protein sequence
MKRVLFLLIF CAFTIASRAQ VPVENSLLWE ISGRGLAKPS YLFGTIHLIC PTDFSISDSL 
KSTLARTQQV ALEMDMDDPG MMTGMMKTMN MTDGNELKKL VTASEYERLN RFFTDSVHVG
LAMFERAKPF ILMGPLFNAL LDCQPQSYEM ALVELAGKQK SEVIGIETLE EQMAIFDTIP
YKDQAKMLLT LIDSLPSAKK EFRSLVALYK MQDISKLYDL TMKSDFGMDG NEEVMLFARN
QKWIPRIRRI ASAKPTFFAV GAAHLGGERG VIALLRKEGF QVRAVK