| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3382 |
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| Symbol | |
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| ID | 8226961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4138414 |
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| End bp | 4140228 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644931213 |
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| Product | TonB family protein |
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| Protein accession | YP_003087757 |
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| Protein GI | 255037136 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACGC TCCTTTATTT GTTGAAAGTC AATTTGTACT GGGGCGCATT TTACGCCTGC
TACTGGCTCC TGCTCCGCAA GCACACTTTC TTTCACTGGA ACCGTTTCTA CCTGCTGGGT
TCGTTACTGA TCGCCTTCGC ATTGCCTGCA TTACGCTTCT CAGCACCGGT AACGACCATT
TACGTACCCG AAACCGTCTA CCAGAAAGCG ACTATCTCAG TAGCCGTGGT GGCCGGCCAT
GCTCCGCAAA CAGGTAGCGG TGAATGGCTG TGGCTGATCG CAGCTGCGTA TCTTGCCGGC
GTGGTCGTGC TGGGATGGCA ATTCCTTTCC GGTTTGAGGC GGTTGATCCG GATAGCGCGC
CAAAGTGAAA CAATCGGAAT GGGCCAGTAC ACGCTCGTAA TGCTGCCGGA ATGCAATGTT
AGGCACGGCG GAAGCTCTTT TTCGTTTTTC CACTGGCTAT TCCTGAGCGC ACACGACTAC
CGGCACAACC CCGACGCGGT GATCCGCCAT GAATGCGAGC ACATCCGGCA ATGGCACACG
GCGGACATAC TGGTGGTCGA ACTGCTCAAA ATCGGTTTCT GGTTCAATCC GGTGCTGTGG
CTTTACAAAC GCTGCATTCA AACCGTGCAC GAGTACCTCG CCGACCAGCC GGTTCCCGAC
CGGCACGGTT ACGCGTCGTT TCTCGTGGCT TATGCGCTCC GCAGCCCGGA TATCGCGGTG
GCTAATCATT TTTTCAACTC GTCGATGCTC AAAAACCGGA TTGATATGAT CTACAAAAAG
CGCAGTTCCC GTTGGCTGCT GGCCAAATAT CTGCTAATCC TGCCGGTGCT CATGTGCTCT
ATGGCCATTT CAGCTTCCCG GTCGCCGTTG CAAGCGATCC AGCGGCTGGA TGCCGCTATC
GGACAGAACA TCCGCGTAAA GGGTAACCTC ACCAATGAAC AGAAAGAGCC TGTTTCGGAT
GCGATAGTGA TCGTAGCCGG AACCACACGC GGCACCACTA CCGACCGGAA CGGCTGGTTT
GAGCTGGACA ATGTGCCGAC CGGCGCCAAA CTGGTCATCA CGCATGTTGC CTATCAAGCG
GTTGAAGTGA CGGTTTCTGA TAATCAAACC GAGCTCATGC TGGTTATGAA AAAGGCGGTG
AATCAAATCA CCGGCCCGGT GATCGTCGGG AAACCGGCAA CCGCCACAGC GCCGGTAACT
GCCTCCGCGC CCCCTTCGAC GGTGGATCGC AATATGAAAG TGGTAGAGCA GCAACCACAG
TTTCCCGGCG GAAGGGAAGC CCTCATGCAA TATTTAATGC AAAATCTGGA ATATCCTGAA
ATTGCCCGGC AGATCAGACT GGAAGCTATC GCGCTGGTTT CATTCACGGT GGATAAAAAC
GGCGAAATCC GCAATGCCAA AAGCCTGAAA AACATCGGCT ATGGCATCGA CAAGGAAGCG
TTGCGGGTGG TGAACGATAT GCCGAAGTGG AATCCGGCGG TGCAAAACGG TAAGCCGGTT
GAAATGGAAT ACACCCTTGA AGTGAATTTC AAAATGGAGG ACAAAAGTGA GGATAAGCGC
CAGGGGTTCA TGAATTTCAG AGACATTACT CCCGCCTCTT CGATGGAAAA AATAGGTAAG
CTGTTCGGTA ATCCATTAGA CATTCTGGCA TCCGGCAAAG TGCCCGAGGT GAGGTATGGA
GCAGTGAATT ACAAGACTTC AAGCAATGCG GCTACCGAGT ACATGTCGAA TGACAATGGG
ACATACAGGT ATCTCAACTA TGGCCTCACA TCCCGGCGAT ATGCCGCGCC AGTCTTGAAA
TACAGGGCAA AATAG
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| Protein sequence | METLLYLLKV NLYWGAFYAC YWLLLRKHTF FHWNRFYLLG SLLIAFALPA LRFSAPVTTI
YVPETVYQKA TISVAVVAGH APQTGSGEWL WLIAAAYLAG VVVLGWQFLS GLRRLIRIAR
QSETIGMGQY TLVMLPECNV RHGGSSFSFF HWLFLSAHDY RHNPDAVIRH ECEHIRQWHT
ADILVVELLK IGFWFNPVLW LYKRCIQTVH EYLADQPVPD RHGYASFLVA YALRSPDIAV
ANHFFNSSML KNRIDMIYKK RSSRWLLAKY LLILPVLMCS MAISASRSPL QAIQRLDAAI
GQNIRVKGNL TNEQKEPVSD AIVIVAGTTR GTTTDRNGWF ELDNVPTGAK LVITHVAYQA
VEVTVSDNQT ELMLVMKKAV NQITGPVIVG KPATATAPVT ASAPPSTVDR NMKVVEQQPQ
FPGGREALMQ YLMQNLEYPE IARQIRLEAI ALVSFTVDKN GEIRNAKSLK NIGYGIDKEA
LRVVNDMPKW NPAVQNGKPV EMEYTLEVNF KMEDKSEDKR QGFMNFRDIT PASSMEKIGK
LFGNPLDILA SGKVPEVRYG AVNYKTSSNA ATEYMSNDNG TYRYLNYGLT SRRYAAPVLK
YRAK
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