Gene Dfer_3373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3373 
Symbol 
ID8226952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4127667 
End bp4128785 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content54% 
IMG OID644931204 
Productoxidoreductase 
Protein accessionYP_003087748 
Protein GI255037127 
COG category[R] General function prediction only 
COG ID[COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCT TCTTCATCGT CTCTCTTTTG ACGGCACTTA TGATGACAAT GGGCGAAAGC 
TACGCGCAAT GGAAAGTCAT CGACATTAAA ACGAAGATCC ATATGCGTGC GGTACATGCC
GTATCGCCTA CAATCTGCTG GATCGGCGGT ACGCAAGGCA CTGTTTTGAG GACGACGGAC
GGCGGCCATA CCTGGACCAC CTTTAAAGTC GCCGGCGCCG ACTCGCTCGA CTTCCGCGAC
ATTCACGCCT TCGATAAGGA TGTGGCGATC GCCATGAGTG CCGGGGAATC GGAGAAGGAC
AAAGCTAAAA TTTACAAGAC CGACGACGGC GGCCAGAGCT GGAAGCTTGT GTACCAAACT
ACACAAAATG GGGTTTTTCT GGATGGAATC GACTTTTGGG ATAAAAATAA AGGCATTTGC
CTCGGCGATC CAACACAGGG ACGACTCTTC ATTTTGACAA CCGAGGACGG CGGAAATTCC
TGGCAGGAAC TCCCGCTCGA CAAGCGCCCG GCCGCCGAAC CCGGCGAGGC CTGCTTCGCT
GCGAGCGGCA CGTCTATTCT TGTAAACGGC AAGGGCAATG CATTCATCGG AACCGGCGGA
AGCAAAATGG CCCGCGTTTT CCGCACGGAA GATTACGGCC AAAGCTGGCA GGTGTCCGCT
ACCCCATTAC CCGCCGGGCC TACTGCCGGT ATTTTCGGGT TAAGGTTTTG GTCCAAAAAG
AATGGCATTG CTGTGGGCGG TGACTATAAA AAAACTACCG ATTCGACCCA AAACGTACTT
GTGACGAACG ACGGAGGCAT TACCTGGACT TTATCCGGCA TGACCAAACC CGCCGGTTTG
AAAGAATCCG TAGCCGTTTA CCACAAAACC AACGCCACCT GGAACGGCGA CACGCAGATC
CGCTCCGACA ACTATGCATT GGTTGCGTCG GGCCCGTCCG GCAGCAGCGT TTCCCTGGAT
CGTGGGAAAA GCTGGATCCT GCTCGGCACG GAAGGTTTCC ACTCGCTCAG TTTCGCCGGA
AATGTGGGCT ACGGCGTCGG AGCGAATGGT TTAATCGGGA AAATCGAAAA GATTTCTTCC
AAAAAGAAAA AGAAGAAGCT GGTGCTTGTG GACCAATAA
 
Protein sequence
MNGFFIVSLL TALMMTMGES YAQWKVIDIK TKIHMRAVHA VSPTICWIGG TQGTVLRTTD 
GGHTWTTFKV AGADSLDFRD IHAFDKDVAI AMSAGESEKD KAKIYKTDDG GQSWKLVYQT
TQNGVFLDGI DFWDKNKGIC LGDPTQGRLF ILTTEDGGNS WQELPLDKRP AAEPGEACFA
ASGTSILVNG KGNAFIGTGG SKMARVFRTE DYGQSWQVSA TPLPAGPTAG IFGLRFWSKK
NGIAVGGDYK KTTDSTQNVL VTNDGGITWT LSGMTKPAGL KESVAVYHKT NATWNGDTQI
RSDNYALVAS GPSGSSVSLD RGKSWILLGT EGFHSLSFAG NVGYGVGANG LIGKIEKISS
KKKKKKLVLV DQ