| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3360 |
|---|
| Symbol | |
|---|
| ID | 8226939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 4112389 |
|---|
| End bp | 4113843 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644931192 |
|---|
| Product | OmpA/MotB domain protein |
|---|
| Protein accession | YP_003087736 |
|---|
| Protein GI | 255037115 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.159915 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG TATCCCAGTT GATTGGTTCG TTTGCCTTGG GAGCAATGAT GGCGCTGCCT
TCATTCGCAC AGCCGCTGGT GCAACCGAAT TCTCCGGATT ACAATCCAAA AGCGACGTAC
GATGGCCCTT ACAAATTGAA CACCTGGTCA ATTTCCGCAC ACTTTGGCCC GTCGATGTTT
TTTGGTGATT TAAGAGAATA TGACTTCTGG CCTGTTACCA AAACTTCATC CGACAGCCAC
AAGGAATCCG GTACTTTTCA AGGAGGCCTC ACACTGAACA AACAACTTTC CTACCTGTTC
GGCGCCCGTT TGGACGCGTC TCTGGGCAAC CTGAGAGGTA TGAAACGCCG TACTTATAAC
CGCTATTTCG AAGGCAACTA TTTCGATGTT TCTCTTTCAG GAACTGTTAA CCTGAAAGGA
CTTCTGATGG GGCCTAACAA AATGAAGCGC TGGAAAATCG ATGCGTATGC AGGTATCGGT
CAGGTGTTCT ACGACGCTAC CGCTTACGAT CTTACAGGTG GTGTGAAGCT TCGCGAAACC
GGCAACATGA ACGACTGGAT CGTTCCAACA GGTTTGAACG TAAACTACGA AGTAACGCCA
AGAATCGATA TCGGTCTTGA CTTCCGTTTG ACTCACACCA ACTCTGATTA CCTTGATGCT
ACTTACGGCG GCGATTACGA CAGAACGCCT AACAGCTTCA ACATTGCAGA CCAGAAAACT
TCCCGCAAAG GAAACTCTGA GCTTGACAGC TACGGATACG GTGCTGTTCA GGTAACTTAC
AAATTGGGTA AGAAAGCCCT GAAAGTTCAG AAAGTGGACG GCAAATGGGA TTACAAACCA
GAAGAAGGCG GTTACTACCA CCTGCGTTAC ACAGACCCAC GTGTACTGGT TAAGCCTCCG
AAAATCCTTA CACTTGAAGA AATGGACTCT GTTGCAAAAG CAAACCGTCC GAAAGATATC
GACCCGCGTT TGTTGCTTGA TACCGATGGT GACGGTGTTT CCGACTTCTT CGATAAAGAG
CCAAACTCAC CGGCAGGAAG CATTGTTGAC GGTGCTGGTC GCGTACTCGA CTTCGATTCT
TACGTGAAAA ACGCACTGGC AACCGGCGCG GCTTGCTCCG AGATCTTTGC TAACGTAACA
TTCGATACTG ACAAAAACGT ATTGAAGCCT GAATTCCAGG AACTGCTTAA AAACGTAGCA
GCGTTGATGA ACAAAAACGG ATGCCGCTTG CAACTGGCTG GTCACACCGA CCGTCGTGCA
TCTGACCGCT ACAACATCGC GCTTTCAAAA CGCCGCGTAG AAGCTGTTAA AAACTTCCTG
ATCAACGAAG CTGGTCTGCA AGACCCAAGC AAAGTGATCG TAGACTACTT CGGATCATTC
AAACCGATCG CAGACAGCGC AACCCGTCCA GGTTTGCAGA AAAACCGTCG CGTAGAATTG
AAATTGCTTC CCTAA
|
|---|
| Protein sequence | MKKVSQLIGS FALGAMMALP SFAQPLVQPN SPDYNPKATY DGPYKLNTWS ISAHFGPSMF
FGDLREYDFW PVTKTSSDSH KESGTFQGGL TLNKQLSYLF GARLDASLGN LRGMKRRTYN
RYFEGNYFDV SLSGTVNLKG LLMGPNKMKR WKIDAYAGIG QVFYDATAYD LTGGVKLRET
GNMNDWIVPT GLNVNYEVTP RIDIGLDFRL THTNSDYLDA TYGGDYDRTP NSFNIADQKT
SRKGNSELDS YGYGAVQVTY KLGKKALKVQ KVDGKWDYKP EEGGYYHLRY TDPRVLVKPP
KILTLEEMDS VAKANRPKDI DPRLLLDTDG DGVSDFFDKE PNSPAGSIVD GAGRVLDFDS
YVKNALATGA ACSEIFANVT FDTDKNVLKP EFQELLKNVA ALMNKNGCRL QLAGHTDRRA
SDRYNIALSK RRVEAVKNFL INEAGLQDPS KVIVDYFGSF KPIADSATRP GLQKNRRVEL
KLLP
|
|---|
| |