| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3359 |
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| Symbol | |
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| ID | 8226938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4111028 |
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| End bp | 4112161 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644931191 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_003087735 |
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| Protein GI | 255037114 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.142206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGTTTA CACTACAAGT TGAGGATCCC CATTCGAAAG CGAGGGCCGG ATTGATCGAG
ACGGATCATG GGGTAATCCA GACGCCCATC TTCATGCCTG TGGGTACCGC GGGGACGGTG
AAGGCTGTTC ATCAGCGGGA GTTGAAAGAA GATGTCAAAG CACAGATCAT ATTAGGAAAC
ACCTATCATT TATATCTCCG CCCGGGGCTC GACCTGATGG AAAAAGCCGG AGGCTTGCAT
GCGTTCAACG GATGGGACCG CCCGATTCTG ACCGATAGTG GCGGTTATCA GGTGTATTCG
CTCGCCGGAA CCGGCCGCAA GATAAATGAA GAAGGTGTGG TATTTAAGTC ACACATTGAC
GGTGGCGTAC ACACATTCAC GCCCGAAAAC GTGATGGACA TCCAGCGGAC GATCGGCGCG
GACATTATTA TGGCGTTCGA CGAATGCACG CCTTACCCTT GCGAATTCAC CTATGCGCGC
AAATCGATGG AAATGACGCA CCGCTGGCTC ACGCGGTGCT GCGACCGTTT CGACAGCACC
GAGCCGCGCT ACGGACACAG CCAGACGTTA TTCCCTATCG TTCAGGGGAG TGTCTACAAA
GACCTCCGCA AGCAGTCGGC AGAGTTTATC GCTTCTGCCG GGCGCGAAGG CAATGCCATC
GGCGGTCTTT CGGTAGGCGA GCCGGCTGAG ATCATGTATG AACTCACCGA GGTGGTATGC
GATATTTTGC CCAGGAACAA GCCGCGTTAT CTAATGGGCG TAGGTACCCC CGCCAACATT
CTCGAATGCA TTGCGCTCGG GGTGGATATG TTCGATTGTG TAATGCCTAC CCGCAATGCA
CGCAATGGCA TGATTTTTAC AACGGAAGGA ATCATTAATA TTCGGAACGA AAAGTGGAAA
GACGATTTGT CACCGATAGA CGCCGGACTT GGAGGGCACG TTAGTACATT TTACAGTAAA
GCCTATCTGA GGCATCTTGT AAAATCCGGG GAAATGCTCG GAGCGCAGAT TGCGAGCATC
CATAACCTGA CATTCTATTT GTGGCTGGTT AACAGTGCGA GAGAGAAAAT TATCGACGGA
AGTTTCGCTT CATGGAAGCG GGAAATAGAA AAAAAATTGA ATCAACGGCT TTGA
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| Protein sequence | MKFTLQVEDP HSKARAGLIE TDHGVIQTPI FMPVGTAGTV KAVHQRELKE DVKAQIILGN
TYHLYLRPGL DLMEKAGGLH AFNGWDRPIL TDSGGYQVYS LAGTGRKINE EGVVFKSHID
GGVHTFTPEN VMDIQRTIGA DIIMAFDECT PYPCEFTYAR KSMEMTHRWL TRCCDRFDST
EPRYGHSQTL FPIVQGSVYK DLRKQSAEFI ASAGREGNAI GGLSVGEPAE IMYELTEVVC
DILPRNKPRY LMGVGTPANI LECIALGVDM FDCVMPTRNA RNGMIFTTEG IINIRNEKWK
DDLSPIDAGL GGHVSTFYSK AYLRHLVKSG EMLGAQIASI HNLTFYLWLV NSAREKIIDG
SFASWKREIE KKLNQRL
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