Gene Dfer_3343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3343 
Symbol 
ID8226921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4090436 
End bp4091341 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content56% 
IMG OID644931174 
ProductNitrilase/cyanide hydratase and apolipoprotein N- acyltransferase 
Protein accessionYP_003087719 
Protein GI255037098 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.265588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGG CAGTTACCAT TACTTCGGCA CAATACCCGA TCACCGAACA CGCAGATTTT 
GCTTCGTGGC AGCGGCACAC CGAAAAATGG GTTGCCGACG CCGCCATCCG GGGCGCAAAC
CTGCTGCTTT TTCCGGAATA TGGCGCCATG GAGCTGGTGA GCATTTTCAA CGCGGAAATC
CGCGCCGACA TTCGCCGGCA AATCCAGGAG CTGGATGCCT TGAAAGACGA TTTTTGCAAG
ACATTCGAAA TGCTTGCCCG GAAATACGGT GTCATCATCG TGGCACCGAG CATCCCGGTG
ATCGAGCATG CGAGGAATCT CAACCGCGCA TTTGTGTTCT CACCTACGGG AATGGCCGGT
TACCAGGACA AATTCTTCAT GACGCGCTTT GAAAACGAGC ATTGGGGAAT AGAAAGCGCC
CCACGGCAGC TCACCGTTTT CGAAGCCGAC TGGGGCAAAT TCGGCATTCA GATATGCTAC
GACGTGGAAT TCCCCATCGG CGCGCGAAAG CTCTCCGATG CCGGCGCGAA CCTGATTCTC
GCCCCCAGCT GCACCGAAAC CATTCGCGGC GCCACGCGTG TACACGTGGG CGCCCGCTCG
CGGGCGCTCG AAAACCAGTG CTACACGGTC GTATCACAAA CCGTCGGCGA AGCATTATGG
TCGCCAGCCG TCGACGTTAA TTACGGCTAT GCCGCTTGTT ACACGACCCC GGACAAGAAC
ATGCCCGAGG AGGGCATTAT CGGCACCATG CCCGCACAGC AAGAAGGCTG GCTCATGCAA
AACCTCGATT TCGCGCTCAT TGAGGAAGTC CGCGCGGACG GGCATGTTTT TAACTTTAAG
GACCAGTCGC GCGTGACGTT GGAAATGAAG GATGCTGCAA TTTCCGTTGT TCATACAAAA
TTATAA
 
Protein sequence
MTQAVTITSA QYPITEHADF ASWQRHTEKW VADAAIRGAN LLLFPEYGAM ELVSIFNAEI 
RADIRRQIQE LDALKDDFCK TFEMLARKYG VIIVAPSIPV IEHARNLNRA FVFSPTGMAG
YQDKFFMTRF ENEHWGIESA PRQLTVFEAD WGKFGIQICY DVEFPIGARK LSDAGANLIL
APSCTETIRG ATRVHVGARS RALENQCYTV VSQTVGEALW SPAVDVNYGY AACYTTPDKN
MPEEGIIGTM PAQQEGWLMQ NLDFALIEEV RADGHVFNFK DQSRVTLEMK DAAISVVHTK
L