Gene Dfer_3339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3339 
Symbol 
ID8226917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4086983 
End bp4088965 
Gene Length1983 bp 
Protein Length660 aa 
Translation table11 
GC content54% 
IMG OID644931170 
Producthypothetical protein 
Protein accessionYP_003087715 
Protein GI255037094 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTTT TGATCCCGCT GGCGATGATA CTGGCCACGG CCAGTTGCTA CGTGGCGCTC 
TACAAAGATT CCGAGCAATC CTTTCGCCGC TCGCTGATTA CAGCTTCCAT ACTCGTTTTC
TTCTTTATCG CAGTCAGTAC CGAGCTGCTG GGGCTGCTCA ATGCCGTCAA CCGCTTTGGC
ATTGCCCTAA GCTGGCTGCT ATTCGACGCC GCGCTGGCTG CGACATGGAT TAGGATAAAA
AAGGCCCATC GTGTAACACA CCGGTCGCTG GGTCAAAGAT GGCTAAGCGG CATCCGGCGT
TTTTATCAAA GCGTCGGTCC GCTCACGGTC TTCATGCTGG GCGTACTTTC AGCTATTACC
TTGTGCGTGG CGGTGGTGGC GATCCCCAAC AATCAGGATT CGCTCAGTTA CCATCTCAGC
CGGCTGGGTT ACTGGGCTCA GCAGGGCAAT GTGGCGCATT ACGCCTCGCA CATCGAACGG
TCCATTTCAT TCAGTCCGTT TTCGGAATAT GTTCATTTGC ACACGTTCCT GCTATCCGGC
TCGGTCCATT ACTTTCAGCT ACTGCAATGG GGCTGTCTGG CGGGTATATT ACTGCTCGTT
TCGATGATTG TGAGGCTGTT TTCAACGTCC GCGGCGGCAC TGCGTATCGC ATTGTGCTTC
GCCGCGACGC TCCCGATCGT GGTTCTGGAG TCGATGACCA CCCAGAATGA CCTTGTCGTG
GCATTCTTTC TCGTGGCAAC CGCTTTTTTT GTATTTGATT ATCTCCAAAA CAAACAACAA
ACGAGCCTGT ACCTCATTGC GCTCTGCTGT GCCGCCGGCA TGTTCACCAA AGGAACGTTC
CTATTTTACG CCCTCCCTTT CGGCGGCTAC CTCATCATCC GGATGATCGG GCAACCGGCC
ATGCGGAAAC ACCTCTTAGG CTTTGTGGCC GCTGGTGTGG TGCTCACGCT GGCGCTCAAC
ACACCGTTTT GGTACCGCAC TTATGTGCTG TTCGGCTCGC CCGTCGGCAC AATCAGCAAT
GGCAACCAAA ACGACCTGCA ACGCCCCGCC GACTATGTTT CGTCGGTAAG CAAGCATGTT
TTCCTGCATC TCGGCTTCGT TTCCCCCGGC AACCGCTATA ACGATTTCCT TCACACGCAG
CTCAAAAATC TGCATGCGGC GATGGGCATT CCGCTCGACA GGCCGGGCCT GGGAATGCCG
TTCAAGATGA ATAAGCTGAA TTTCAACGAG GATTTTGCCC ATAATTTTTT CGGGATCTGG
CTGATCCTCG CCGGTATTCC GCTGCTCTGG TGTGCACGTT TGCAACGAGC GGCCAATTGG
TACGCAGCGC TCACATTGCT CAGCTTTCTC ACCTTTTGCT TTTTTATCAG TTATCAAACG
TACGGCTCGC GGCTGCATAT CGCATTCTTT CTGCTTGCTG CGCCTGTGGT AGGCATTGCG
TACGCTGCGG TGCTGCCCGC ATTCCTGTCG CGTTTGCTGC CCGTGGTGCT CTGGCTGGCG
GCGCTGCCAT TCGCGTTACT CAGCGCATCG CACCCGCTGC TTTCCACCCG TTGGTTTTTT
GAAAAAATAT TTCCGACGGT TAACAATGCC TTGCATTTGA ACATGCGCAT CGACGCTGCC
AACCTGAACC TCAAACAGGA AAGTGTACTG CACGCCACGC CGGGCCGGCT GTTCTGGGGC
GACCATTGGG CCGGGCTGCA AGGACTTTTC GAGCGGGCAA ACGCACTCAA TCCCCAAAAA
ATCGGTTTTG CTTTTACGGA AGCCAGTTTC GACTTCGCCT ACCAGTTTTT GCTTCGGAAG
CCCGGGCGTG AATTTGCCCA CGTGATGGTC GGTAATCCGT CGCGGGTGCT GGAAAATCCC
GTATTTCAGC CGGATTTGAT CATTTCCGAA AAGAATATGG GTAACGGGTT TGATTACAAT
GGTCAATCCT ACCGGCTCGA CTGGCAAAGT GACGACCGAT GGCTGTACGT TTCAGTGAAT
TGA
 
Protein sequence
MILLIPLAMI LATASCYVAL YKDSEQSFRR SLITASILVF FFIAVSTELL GLLNAVNRFG 
IALSWLLFDA ALAATWIRIK KAHRVTHRSL GQRWLSGIRR FYQSVGPLTV FMLGVLSAIT
LCVAVVAIPN NQDSLSYHLS RLGYWAQQGN VAHYASHIER SISFSPFSEY VHLHTFLLSG
SVHYFQLLQW GCLAGILLLV SMIVRLFSTS AAALRIALCF AATLPIVVLE SMTTQNDLVV
AFFLVATAFF VFDYLQNKQQ TSLYLIALCC AAGMFTKGTF LFYALPFGGY LIIRMIGQPA
MRKHLLGFVA AGVVLTLALN TPFWYRTYVL FGSPVGTISN GNQNDLQRPA DYVSSVSKHV
FLHLGFVSPG NRYNDFLHTQ LKNLHAAMGI PLDRPGLGMP FKMNKLNFNE DFAHNFFGIW
LILAGIPLLW CARLQRAANW YAALTLLSFL TFCFFISYQT YGSRLHIAFF LLAAPVVGIA
YAAVLPAFLS RLLPVVLWLA ALPFALLSAS HPLLSTRWFF EKIFPTVNNA LHLNMRIDAA
NLNLKQESVL HATPGRLFWG DHWAGLQGLF ERANALNPQK IGFAFTEASF DFAYQFLLRK
PGREFAHVMV GNPSRVLENP VFQPDLIISE KNMGNGFDYN GQSYRLDWQS DDRWLYVSVN