Gene Dfer_3337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3337 
Symbol 
ID8226915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4084849 
End bp4085871 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content56% 
IMG OID644931168 
Producttransport system permease protein 
Protein accessionYP_003087713 
Protein GI255037092 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGGCT TGCTGGGTGT GCTGGCGGTC GCGCTGTTCT GCCTGGACAT TATGCTGGGT 
TCGGTAGCCA TTCCGTTCAA GGAAGTGTTC CGCATTGTCA CCACGGGCGA GTCCGAAAAC
CGTGCATGGC TTTTTATTAT TGAAAAAATC AGATTGCCGA AAGCGCTTAC CGCTGTGCTG
GCTGGCTGCG GCCTTTCCGT GAGTGGCTTG CAAATGCAAA CGCTCTTCCG TAACCCGCTG
GCCGGGCCGT CGGAGCTGGG CATTACCGCC GGGGCCGGGC TGGGTGTTGC GGCCGTGATG
CTCGCAGGCG GAAGCAGTGC GAGCATGTAT GCGATCAGCC AACTGGGCAT TTCGGGGAGC
TGGCTTATTA TCGGCATGGC CTCGCTGGGC TCGGGGCTGG TGCTGTCGCT CATTCTGCTC
ATTGCAGGCA GGGTCCGCGA CAATGTGATC CTGCTCATCG TAGGCGTCAT GATCGGCACC
ATTACCCTAT CTATTATCAG TATTTGGCAA TATTTCAGTC AGCCGGAACA ATTGCAGGAG
TACATTATGT GGACGTTCGG CTCGCTGGGC GGTGTTACGG GCTATCATTT ATACGTGCTG
TCGGGTGTAG TAACGGCGGG CTTGATGCTC GCATTTGCTT CTTCCAAATC CCTTAATGCA
TTGCTTTTAG GTGAAAACTA TGCGCGAAGC ATGGGGCTCA CCGTCGGGCG GACCAGGCTT
GTGATCATGC TTAGCACGAG CCTGCTCACG GGCAGCATTA CCGCCTTTTG CGGTCCTATC
GGCTTTGTGG GCATCGCCAT TCCGCATATT GCCCGGCCGC TTTTCAAAAC GTCCAACCAT
CGGGTGCTCA TTCCGGCTAC CTGTCTGGCG GGGACGGTGC TGCTGCTGCT TTGTGATATC
ATTGCACAGC TCCCCGGTTC TCAAACCGTC ATTCCGATTA ATGTGGTGAC CTCCCTGCTG
GGTGCGCCGG TGGTCATCTG GATCATTATT CGCCGCAATA ATATACGCTC CGCATTTTCA
TGA
 
Protein sequence
MFGLLGVLAV ALFCLDIMLG SVAIPFKEVF RIVTTGESEN RAWLFIIEKI RLPKALTAVL 
AGCGLSVSGL QMQTLFRNPL AGPSELGITA GAGLGVAAVM LAGGSSASMY AISQLGISGS
WLIIGMASLG SGLVLSLILL IAGRVRDNVI LLIVGVMIGT ITLSIISIWQ YFSQPEQLQE
YIMWTFGSLG GVTGYHLYVL SGVVTAGLML AFASSKSLNA LLLGENYARS MGLTVGRTRL
VIMLSTSLLT GSITAFCGPI GFVGIAIPHI ARPLFKTSNH RVLIPATCLA GTVLLLLCDI
IAQLPGSQTV IPINVVTSLL GAPVVIWIII RRNNIRSAFS