Gene Dfer_3331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3331 
Symbol 
ID8226909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4076525 
End bp4077166 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content50% 
IMG OID644931162 
Productmetallophosphoesterase 
Protein accessionYP_003087707 
Protein GI255037086 
COG category[R] General function prediction only 
COG ID[COG1407] Predicted ICC-like phosphoesterases 
TIGRFAM ID[TIGR00024] putative phosphoesterase, SbcD/Mre11-related 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATTG AGATCAGAGG CAACCATTTT TTATTATTGA CGCAGCGGGC GATTTTTTGG 
GAAGAAACGC AAACATTACT GATCGGGGAC CTGCATTTGG GCAAAGTGAC GCATTTCAGA
AAGGAGGGCA TCGCCATCCC GAACAATGCC GCGGCCAACA ATTTCGAGCG GCTCAATCAA
ATCGTGCAGC AAACAGGCGC CACACGCATC ATTTTCCTCG GCGACCTTTT TCATAACCAA
TACAATTCGG AATGGGAAAC CTTCCGCGAA TGGCGCGCCG AGCACCATTA CATCGACATG
ATCATCGTCA TGGGCAACCA CGACATACTG CCCATGAGCC TGCTCCTTGA ATGTGATTTG
GAGGTTTATG TAAATGATTA TGAAGAAGAT ATATTTATTT TCACCCACCA CCCGAGAGTA
GAATTCGACC CATCAAAATT CGTTTTCGCG GGCCACGTGC ATCCCGTTTT CACTTCCTAC
GGGCGGGGCC GGCAAAGCGT GCGGCTGCCC TGCTTCGTGA TTGACAAGCA CCAGGCTATC
CTGCCGAGCT TCGGCGTGTT CACGGGAGGG TATCAAATGG GGCTCGCGGA TGATCGGAAG
ATTTATATTA CTACGGAGAC TCGGGTATTT TCTGTTTGTT AA
 
Protein sequence
MQIEIRGNHF LLLTQRAIFW EETQTLLIGD LHLGKVTHFR KEGIAIPNNA AANNFERLNQ 
IVQQTGATRI IFLGDLFHNQ YNSEWETFRE WRAEHHYIDM IIVMGNHDIL PMSLLLECDL
EVYVNDYEED IFIFTHHPRV EFDPSKFVFA GHVHPVFTSY GRGRQSVRLP CFVIDKHQAI
LPSFGVFTGG YQMGLADDRK IYITTETRVF SVC