| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3325 |
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| Symbol | |
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| ID | 8226903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4070678 |
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| End bp | 4072681 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644931156 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_003087701 |
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| Protein GI | 255037080 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCTC TTTCCATTCT GCTTGTTGAA GACGACGACA TCGACGCTAT CAAACTGAGC
CGTGCAATCA GCAGGGCGCA AGTTGAAATA GGGGAGATCC GAGTATGCAA ATATGCCGAA
GAAGCGCTCC GGATGCTGGA AACGTGGACG CCTGGCTGCA TTTTTCTGGA CTACCAGCTG
CCTAAAACCA ACGGTTTGGA ACTGCTCAAA ACCGTGAAAC TCCGCGCGCC CCACCTGCCC
GTGATCGTGC TAACCTCGCA TGGCGACGAG CGCATTGCCG TCGAGATGAT GAAAGCCGGG
GCGCTGGATT ACTTTCCAAA ATCGGAAGTG AACCCCGAAA AACTCACGAA GGCCTTCCAC
ACCATGAGCC AGATGCTCGA AATGGAAAAA GGCCGGGAAG TAGCGGAGCA CGAATTGGCT
GAGAAAGAGG AATTTATTAA TAAAATCGCG CTCCTTTCGC CCAATATCAT TTATGTGATT
GATATTGAAA AATGGACCAA TATTTTCCAC AACAAGCAAA TCTGGAAAAT ACTCGGCTAC
TCGGAACACG AGGTAGAAAC CGACACCCGC AAGGGCCTTG CGCGGATTAT CAACGAGCGC
GACCAGCATA CTTTCCGCGC GCATTACAAC CACATGCGCT ACAGTGTGAA AGATGCGGAA
GTGGTTGAAA AGGAATTCAG GTTGAAACAC AAAAACGGCT CGGAAATCTG GATTATCACC
CGTGAAGTGC CTTTCAAAAG GAACGCGCGC GGGCGTGTGC AGGAAGTGCT GGGCACGGCC
ATCGACATTA CGGCCCGCAA AATCGCCGAA AAGGAGCTCA TTCAGGCGAA AAAAGATGCC
GAAGAGGCTA CCCGCATCAA ATCCGACTTC CTATCGACGA TGAGCCACGA GATCCGGACG
CCGATGAATG CGATCATCGG ATTCACCGAC CTGCTCCTAT CGAGCGGGTT TACCGGACAG
GAGCAGCAGT ATTTGAACAC CATTAAATAT TCCGCTGATA ATCTGCTGGT TATCCTGAAC
GACATCCTCG ATTTTTCGAA GATCGAAGCG GGAAAATTCG GTCTGGAAAA CTTCGAATTC
GACCTGCGCG AGAAGTTGGG ATACCTCATG AAAACGTTCG AAATCCGTGC GAAGGAGAAG
TCGATCCAAT TCACTTTCCA ATGCAGCACC GACGTTCCGC AGATCGTCAT GGGCGACCCT
TACCGGCTGA ACCAAATCAT GGTCAACCTG ATCGGCAACG CCATCAAATT CACCGAAGAA
GGCGGTTCTG TGGAAGTATC CGTGCACCTC GATAAAGATC ACGGCGACAG CATCGACCTG
AAAATCGACG TGTCCGATTC AGGAATCGGC ATTTCGGAAG ACAAGCTGAG CGTGATTTTC
GACAGCTTTT CCCAAGCGCA CAACAACAAT GCCGTCCGCA ACTTCGGCGG CACGGGGCTG
GGGCTAAGCA TAACCCGCAA GATCACCGAG CTCATGAATG GCTCCATTTC GGCCCGCAGC
ACGCTGGGCA AGGGAAGCAC ATTCACGGTG GTCCTCAATT TCGGCAAGGG AAGCACGTCC
TATGAAGAAG AAAAAACCAA TGCGCCGACG AAACTGTCTT TAAAAGGCTA TCGCATTCTG
GCCGCCGAGG ACATTTTCGC GAACCAGATC CTGCTGAAAC ACCTGCTGGA AAAATGGGAA
GCCGAGTTTG TGATTTGCAA CAACGGAAAA GAGGTGCTGC ACATGCTCGA AACGGAAGAT
TACGACCTGA TCCTGATGGA CATCCAAATG CCGGTCATGG ACGGCGTAAC GGCCATGAAG
AAGATCCAAA GCTCCTATCC GCGCCATCAC CACGTCCCGG TAATCGCGCT CACCGCCGAT
ACCTTCGCGG AAAAAACACC CGAAATCGCC GCCTGCAATT TCAGCGGGTT TGTGACGAAA
CCGTTTAAAG CGGAAGAGCT GATCAGGGCA ATTAATAAGC ATCTGAAAGT AAAGGTCCCG
CCGAATCATG CGGTGATTGG GTAA
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| Protein sequence | MPPLSILLVE DDDIDAIKLS RAISRAQVEI GEIRVCKYAE EALRMLETWT PGCIFLDYQL
PKTNGLELLK TVKLRAPHLP VIVLTSHGDE RIAVEMMKAG ALDYFPKSEV NPEKLTKAFH
TMSQMLEMEK GREVAEHELA EKEEFINKIA LLSPNIIYVI DIEKWTNIFH NKQIWKILGY
SEHEVETDTR KGLARIINER DQHTFRAHYN HMRYSVKDAE VVEKEFRLKH KNGSEIWIIT
REVPFKRNAR GRVQEVLGTA IDITARKIAE KELIQAKKDA EEATRIKSDF LSTMSHEIRT
PMNAIIGFTD LLLSSGFTGQ EQQYLNTIKY SADNLLVILN DILDFSKIEA GKFGLENFEF
DLREKLGYLM KTFEIRAKEK SIQFTFQCST DVPQIVMGDP YRLNQIMVNL IGNAIKFTEE
GGSVEVSVHL DKDHGDSIDL KIDVSDSGIG ISEDKLSVIF DSFSQAHNNN AVRNFGGTGL
GLSITRKITE LMNGSISARS TLGKGSTFTV VLNFGKGSTS YEEEKTNAPT KLSLKGYRIL
AAEDIFANQI LLKHLLEKWE AEFVICNNGK EVLHMLETED YDLILMDIQM PVMDGVTAMK
KIQSSYPRHH HVPVIALTAD TFAEKTPEIA ACNFSGFVTK PFKAEELIRA INKHLKVKVP
PNHAVIG
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