Gene Dfer_3317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3317 
Symbol 
ID8226895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4062908 
End bp4063912 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content56% 
IMG OID644931148 
ProductNAD(P)H quinone oxidoreductase, PIG3 family 
Protein accessionYP_003087693 
Protein GI255037072 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGA TCGTCATCAC TCAACCCGGC GGGCCGGAAG TATTGCAAAT GCAGGAGGTA 
GCCATGCCGC ATCCGACCGG TTCGCAAGTA CGCATCAAGG TATTCGCGGC AGGTGTAAAT
CGCCCCGATG TTTTCCAGCG GAAAGGCAAC TATCCACCGC CGCCGGATGC ACCGCAGGAC
ATTCCTGGTT TGGAAGTGGC TGGTATCATC GACCAAACGG GCCCGGAGGT TACCATCTGG
AAACCCGGCG ATTCCGTTTG CGCATTGCTG GCGGGCGGCG GTTACGCGGA ATATGCCCTC
GCGGAAGCCA GCCATTGCCT GCCCATACCC GTTGCTTTCA ACCATTATAG CGATGCTTTT
GCCCGGGCGG CCTCGTTGCC GGAAACGGTA TTCACCGTCT GGCATAATGT CTTTCAACGG
GGGCGGCTGC GGAAGGGTGA GCGCTTCCTC GTACACGGGG GCACGAGCGG AATCGGTATT
ACGGCTATCC AGCTGGCCAG GGCATTCGGT GCCAGCGTGT TTACCACCGC AGGGTCGGAA
GAAAAGTGTG CTGCGTGCGA TGCATTGGGG GCCGATATCA GCATTAATTA CCGGGAAGCA
GATTTCGAAG AACAGCTGCG CGAGCTCGGT ACAGACGTTA TCCTGGATAT GGTCGGTGGA
AATTATATCC CCAAAAACCT GCGTTTGCTG CGCGAAGAAG GCCGGCTTGT TTTTATCAAT
ACCATGAAAG GCGGAAAGGT CACCGGCGAG GATGTGGTAG ATTTCAGCCT GATCATGCGC
AAGCGGCTCA CCGTCACCGG CAGCACGCTG CGAAACCGCG ACCATGCTTT CAAGGCAGCA
TTAGCACATG AAATACGGGA AAACGTGTGG CCGGTTATGG AACGCGGTGC ATTTCAAACC
GTGATTGCGG AGACATTCCC GCTGGCGGAA GCTGCCAGAG CACATGCATT AATGGAAAGC
AGCGACCATA TCGGCAAGAT CATTCTGCTC AATCAATGGC CGTAA
 
Protein sequence
MKAIVITQPG GPEVLQMQEV AMPHPTGSQV RIKVFAAGVN RPDVFQRKGN YPPPPDAPQD 
IPGLEVAGII DQTGPEVTIW KPGDSVCALL AGGGYAEYAL AEASHCLPIP VAFNHYSDAF
ARAASLPETV FTVWHNVFQR GRLRKGERFL VHGGTSGIGI TAIQLARAFG ASVFTTAGSE
EKCAACDALG ADISINYREA DFEEQLRELG TDVILDMVGG NYIPKNLRLL REEGRLVFIN
TMKGGKVTGE DVVDFSLIMR KRLTVTGSTL RNRDHAFKAA LAHEIRENVW PVMERGAFQT
VIAETFPLAE AARAHALMES SDHIGKIILL NQWP