Gene Dfer_3292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3292 
Symbol 
ID8226870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4037255 
End bp4038250 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content49% 
IMG OID644931124 
ProductRibonucleoside-diphosphate reductase 
Protein accessionYP_003087669 
Protein GI255037048 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0208] Ribonucleotide reductase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAAG AACTTAGCAG ACAGGAACCC CTGTTGACCG AAGATCCCCT GCGGTTTGTC 
CTGTTCCCGA TCAAACATTC CGACATATGG GAAATGTACA AACGTCACGA AGCCTCATTC
TGGACGGCCG AGGAAATCGA CTTGTCGCAG GATATGAAGG ATTGGGAGAA TCTGAGTGAT
GGTGAAAGAC ATTTTATTTC CCATGTACTG GCGTTCTTCG CGGCGTCCGA CGGGATTGTC
AATGAAAACC TGGCTGTCAA TTTTCTTAGC GAAGTGCAAT ATGCCGAAGC CAAATGCTTC
TACGGTTTCC AGATTGCGAT GGAGAACATC CATTCCGAAA CCTATTCGCT GCTGATTGAC
ACATACATTA AGGATTCGGC AGAAAAAGAC AGGCTGCTGC GTGCGATCGA AACCATTCCA
TGTGTACAGA AAAAAGCCGA CTGGGCATTG AAATGGATCG ATAGCCCCGT ATTTGCGGAG
CGCATCATCG CATTTGCGGC GGTGGAAGGT ATCTTCTTCT CGGGTTCATT CTGTTCGATA
TTCTGGCTCA AAAAACGCGG CCTGATGCCC GGACTTTCGT TCTCGAACGA GCTGATCTCG
CGCGACGAAG GGTTGCATTG CGAGTTTGCA TGCTTGCTTT ATACCAAACA CATTCTGAAC
CAGCTTCCGC AGGAACGCGT GATCGAAATC ATGCTGGATG CGGTGGAAAT TGAGAAAGAA
TTTGTCAGTG AGGCACTTCC GGTGTCGCTG ATTGGCATGA ATGCCGATCT GATGAAGCAG
TACATCGAGT ACATCGCCGA TTTCTGGCTC GAAAGACTCG GCTGCCCGAA ACAATTCGGT
TCAGCCAACC CATTCGATTT CATGGAGCTT ATCTCGCTTC CGGGCAAGAC CAACTTCTTC
GAAAAACGTG TGGGAGAATA CCAGAAAGCC GGCGTAATGA GTGGTGTGAA GGACAAAGAA
TCCGCGCACA AAATTTCGTT CGACTCTGAT TTCTAG
 
Protein sequence
MSQELSRQEP LLTEDPLRFV LFPIKHSDIW EMYKRHEASF WTAEEIDLSQ DMKDWENLSD 
GERHFISHVL AFFAASDGIV NENLAVNFLS EVQYAEAKCF YGFQIAMENI HSETYSLLID
TYIKDSAEKD RLLRAIETIP CVQKKADWAL KWIDSPVFAE RIIAFAAVEG IFFSGSFCSI
FWLKKRGLMP GLSFSNELIS RDEGLHCEFA CLLYTKHILN QLPQERVIEI MLDAVEIEKE
FVSEALPVSL IGMNADLMKQ YIEYIADFWL ERLGCPKQFG SANPFDFMEL ISLPGKTNFF
EKRVGEYQKA GVMSGVKDKE SAHKISFDSD F