Gene Dfer_3289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3289 
Symbol 
ID8226867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4034141 
End bp4035127 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content41% 
IMG OID644931121 
Productglycosyl transferase family 2 
Protein accessionYP_003087666 
Protein GI255037045 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGTA TATCAGTAGT AATCCCCAAC TATAACGGGA AACATCTGTT TGAAAAATAT 
TTTGAACATA ATTATAAGGT CCTTCAAAAA CTTGAAACCA GCGTTCAGAT AATCGTCATC
GACGATGCAT CTACGGACGA TTCGGTGGCT TACCTTGAAG AACATTATGG CGATAAAATC
ACGCTGATCC GTAAAGAAAC CAATTCCGGA TTTTCAGAAA CCTGCAATAT CGGCATCCAG
AATGCCACCA ACGATTTAAT ATTCCTTTTA AATACAGACG TAACCCTTGA ACCGGGTTAC
ATGGAAAAAC TATATAAGTA TTTCGAATTG GAAGACACTT TCGGTGTAAT GGGAAGGGTA
ATCGGAATGA ACGACGACCT CATCCGTGAA GCTGCGAGAG AGCCCAAAAT TTCGGGAAGA
AAAATCAAGT CATCCGATTT CTTCCATTTA CAGAATATCA ATGCATTTAC GCCTACATTT
TATTTATCAG GCGCCATTGC ATTAATGGAT ACGCAAAAGC TGAAAGCTAT CAATGGATTC
AACGAAATGT TCAATCCCTA TTATGGCGAA GATCAGGAAC TTTCGATTCG CGCGTGGCGA
CTGGGCTGGA AATGTTATTA TGAACACGAT GCCGTTTGCC GGCATGAAGT TTCGGCCAGC
ACGAAAAACC ATAACCATAA AAAAGCGATC AAAAGAATCC ATTTCCGCAA CCGGTATTAT
GTTCATTACC TGCATTTGCA AGGTATGGAC CTTAAATTAT GGCACCTGCA AATTCTGCTT
TGCGACGTGC TGCTCGGCAT GCTGACGCTT CAATTTTTCA AGGTCGAAGC CTATTGGGAT
TTCATTAAGA ACCGGGGAAA TTTGCAAGCG AAGAAAGTGG CTTTCAACCG CGAAATGAAG
AAACATCAGT CCGAAATCGG CATTATCGAT GTGATCAATA ACTTCCGGAT GATGCTGAAA
TATCAACAGG TCATTAAGCT AAACTAG
 
Protein sequence
MKSISVVIPN YNGKHLFEKY FEHNYKVLQK LETSVQIIVI DDASTDDSVA YLEEHYGDKI 
TLIRKETNSG FSETCNIGIQ NATNDLIFLL NTDVTLEPGY MEKLYKYFEL EDTFGVMGRV
IGMNDDLIRE AAREPKISGR KIKSSDFFHL QNINAFTPTF YLSGAIALMD TQKLKAINGF
NEMFNPYYGE DQELSIRAWR LGWKCYYEHD AVCRHEVSAS TKNHNHKKAI KRIHFRNRYY
VHYLHLQGMD LKLWHLQILL CDVLLGMLTL QFFKVEAYWD FIKNRGNLQA KKVAFNREMK
KHQSEIGIID VINNFRMMLK YQQVIKLN