| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3282 |
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| Symbol | |
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| ID | 8226860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4025117 |
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| End bp | 4028374 |
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| Gene Length | 3258 bp |
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| Protein Length | 1085 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644931114 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003087659 |
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| Protein GI | 255037038 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.260131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAC ATTTACTAGT CCCGCTTTTC CGGGGTGTCA TGATTATGCT GTTTGCAATA
GCAGCGCATT TATCGTACGC CCAGGATCAT CAGGTCAAGG GTAAAGTATC CTCCTCTGCT
GATGGAACCG GCATTCCCGG CGTAAACGTA CAATTGAAAG GAACGGCTGT GGGTACCGTT
ACCGACGCGG ACGGTAGCTA CGCTATCGAC GTAAAAGGTA CCGACGCGGT CCTGGTTTTC
TCCTCAATCG GATTAATCAA GAAAGAAGTA ACGGTTGGTA ACCAGTCGAC GATCAACGTT
TCGCTCGAAG ACGACATCAA AAACCTGAGC GAAGTGGTGG TAACCGGCTA CGCGGCACAG
CGTAAAAAGG ACATTACCGG CGCGGTAACC GTGATCAACC CCAAAGAACT GACTTCCGTG
CCCACTGCGA GCGTTACGCA GATGCTGCAA GGGCGCGCTT CGGGTGTAAC CGTCGGAAAC
GACAACTCGC CGGGTGGCGG AACGATGGTC CGTATCCGCG GTTTCGGTTC GATTAACAAC
AACAGCCCGC TCTACGTGAT CGACGGCGTG CCTACGCAGG GAACGCTGAA CCAGATCAAC
CCGAACGACA TCGAGTCGAT GCAGGTACTG AAAGACGCTT CGGCAGCTTC CATTTACGGC
GCCCGCGCTG CGAACGGGGT GGTGATCATC ACAACCAAAA AAGGCAAAAC CGGCGCTCCT
AACATTACAT TTGACTTCTA CACCGGCACG CAACGTCCCG GCAAGATGCT CGACCTGCTC
AATACGAAAG AGCTGGGCCA ATATCTGTAC GAAGCTGACC TCGGCGCTGG TAAAAACCCC
TCGGTGACAT CGCCCTCTGC CCAATACAAA TTCGATGAAA ACGGCAACCA GACCGTCGCT
GACTACATTT ATCCGAACAT CTACGGCACG CTGCCTTCGG ACATTATCTA TACCAACGAC
ATTGCCGATC CAAGGCTTGG TAAAACGGCA TTCAACATCA CCCAGGCCAA CAAAGAAGGA
ACCGACTGGC AGGACGTGAT TTTCGATCCG GCACCGATTT CAAACTACCA GATCGGTGCT
TCGGGCGGTT CGGAAGCAGC TAAATATGCA CTTTCGGCCA ATTATTTCAC GCAGGACGGT
ATTTTGAGAT ACACCAAATA CAAAAGGTAT TCCGTACGCG CCAACACCGA ATTCAAGAAG
GGGATAGTAA CTGTGGGTGA GAACTTTACA TTCTCTTACG ACCAGAGACA AGGCATCACC
AACAACGACG AAAGCAACCC GATCATGTTC GCGATCCGCG TGCACCCGAT CATCCCGGTG
TTCGATATCT CCGGCGGCCC GAAGGCGCTT GGCGGAAACA ACACGTCCGA TTACAATGGA
TTTGCAGGAA GCCGCGGCAG TAACCTCGGT AATGCGCCTA ACCCGCTGGC CCGTTTGTAC
CGCGAGAAAG ACAACCTGAC CAAAGGCACG CACGCATTCG GTAACGTGTT TGCGCAAGTG
GACATTCTTC CGGGGCTTTT TGCACGCACC AGCCTTGGTA TCGAATACAA CCAGTCGAAC
CGCTCGGAAT ATTTCCACCG CGACATTGAA GCGGCCGAAG CCCGTAATGC GAACAGCCTG
AACGTGATCA ATAATGTGGA CCGTTCGTTC ACCTGGTTCA ACACTTTGAA TTATGCTAAA
TCTTTCGGCG TGCATAATTT TAATGTCTTA CTGGGTACAG AAGCTGTGAA GACTTACGCA
GCGGAATTCC GGGCGAGCCG GAGCGGATTT GCATTCGACG ACCTCGATTA CCGCTATCTC
GATGCAGGTT CGGCGGCCGG TTTGAGCAAT GCAGGGCCCG GCGCCACGGA AAGTGCGCTG
TTCTCCCAAT TCGGAAAAAT CAATTATGTG TTCAAAGATC TCGTGCTGGC CGACTTCACA
TTGCGCCGCG ATGGCTCATC CCGCTTCTCG GAATCGAACC GCTACGGTAT CTTCCCGGCA
TTCTCTCTGG GTTTGCGGAT GACCGAGCTG GCATTTATGA AGCCTGTGAA GTTCGTCGAC
GATTTGAAAG TGCGCTTCGG CTGGGGTAAA ACCGGTAACC AGCTCATCCC TAACGTTTAT
AATGCTTACA CGCTGTACGC GGCCGATCCG CAGAACAATG CTTACGATAT CAACGGTACC
GGTACGTCCA TCGTAGGTGG TTTTGACCTG GTGCAGTTCG GTAACAGCAA TGGCAAATGG
GAAACGAATA CCTCTACCAA CATCGGTCTG GACGCGTCGT TGTTCAACAG CAAGCTGGAA
GTGGTGCTCG ACCTTTATAA CCGCATTACC TCCGATATGC TAACGCAGAT CGCGATCCCG
AGAACAGCCG GTACCGGTAC GATCCCTTAC ACCAACATTG GCGAAGTACG TAACCGCGGG
GTGGATTTGG GTATTAATTT CAGAGAGAAA AAAGGCGATT TCAGCTACAT GGTGGGCGTA
AACTTTGGCC ACTATAAAAA CGAAGTATTG AAACTGAACA ACGACCCTAA TGCGACGATC
TTCGGTTTCA CAACACGTCT GCCGGCCATG TCGGCCACGA AAGCCGGCCT GCCGATCGCT
AGCTACTACG GCTACTTTGT GGATGGTGTG ATCAAAGACC AGGCGGAAGC GGATGCCGCA
CCGAAATTTG GCTCTTACAC GAGAGAAGGA ACCTTCAAGT TCCGCGATGT GAATGGCGAC
GGCGTGATCA CCGCCGCCGA CCGCACGATT ATCGGCAACC CGCACCCCGA CTTTAACTAC
GGTATCAATG TGGGCGTTGG CTACAAATGG TTCGATCTGA CCTTATTCGG ACAAGGCGTG
CAGGGCAACC AGGTGTTCAA CTACGTGAAA TACTGGACGG ATTTCAACGT ATTCCAGGGT
AACCGCTCGA AAACAATGCT TTACGACTCC TGGAAAAAAC CGGGCGACGA TGCCAAGCTG
CCCCGCCTGA ACTCGGGTGA CGCTACCAGC CAGCAGGTTT CTTCCTACTT CCTCGAAGAC
GGCTCGTATT TCCGCCTGAA AAACATCCAG CTGACCTTCT CGTTGCCGTC TGCCTGGCTG
AAAAAAGCGA AACTGGGCTC TGCGCAGATT TACATTCAGG GACAAAACAT GTTTACGCTC
ACAAAATATA CCGGTCTGGA CCCGGATATC AACCTGAGAA GATCCGGTGA AAACAACCAG
GATACCCACA TGGGCGTCGA TGAAGGCTCC TACCCTGTGG CCAAATCCTA CCTGGCCGGC
CTGCGTTTCA GTTTCTAA
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| Protein sequence | MNKHLLVPLF RGVMIMLFAI AAHLSYAQDH QVKGKVSSSA DGTGIPGVNV QLKGTAVGTV
TDADGSYAID VKGTDAVLVF SSIGLIKKEV TVGNQSTINV SLEDDIKNLS EVVVTGYAAQ
RKKDITGAVT VINPKELTSV PTASVTQMLQ GRASGVTVGN DNSPGGGTMV RIRGFGSINN
NSPLYVIDGV PTQGTLNQIN PNDIESMQVL KDASAASIYG ARAANGVVII TTKKGKTGAP
NITFDFYTGT QRPGKMLDLL NTKELGQYLY EADLGAGKNP SVTSPSAQYK FDENGNQTVA
DYIYPNIYGT LPSDIIYTND IADPRLGKTA FNITQANKEG TDWQDVIFDP APISNYQIGA
SGGSEAAKYA LSANYFTQDG ILRYTKYKRY SVRANTEFKK GIVTVGENFT FSYDQRQGIT
NNDESNPIMF AIRVHPIIPV FDISGGPKAL GGNNTSDYNG FAGSRGSNLG NAPNPLARLY
REKDNLTKGT HAFGNVFAQV DILPGLFART SLGIEYNQSN RSEYFHRDIE AAEARNANSL
NVINNVDRSF TWFNTLNYAK SFGVHNFNVL LGTEAVKTYA AEFRASRSGF AFDDLDYRYL
DAGSAAGLSN AGPGATESAL FSQFGKINYV FKDLVLADFT LRRDGSSRFS ESNRYGIFPA
FSLGLRMTEL AFMKPVKFVD DLKVRFGWGK TGNQLIPNVY NAYTLYAADP QNNAYDINGT
GTSIVGGFDL VQFGNSNGKW ETNTSTNIGL DASLFNSKLE VVLDLYNRIT SDMLTQIAIP
RTAGTGTIPY TNIGEVRNRG VDLGINFREK KGDFSYMVGV NFGHYKNEVL KLNNDPNATI
FGFTTRLPAM SATKAGLPIA SYYGYFVDGV IKDQAEADAA PKFGSYTREG TFKFRDVNGD
GVITAADRTI IGNPHPDFNY GINVGVGYKW FDLTLFGQGV QGNQVFNYVK YWTDFNVFQG
NRSKTMLYDS WKKPGDDAKL PRLNSGDATS QQVSSYFLED GSYFRLKNIQ LTFSLPSAWL
KKAKLGSAQI YIQGQNMFTL TKYTGLDPDI NLRRSGENNQ DTHMGVDEGS YPVAKSYLAG
LRFSF
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