| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3281 |
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| Symbol | |
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| ID | 8226859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4021949 |
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| End bp | 4024801 |
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| Gene Length | 2853 bp |
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| Protein Length | 950 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644931113 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_003087658 |
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| Protein GI | 255037037 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAATACT TAAATGGCCT CGAAGTGGCA GAACAGGACC TCATCGAGGT ACAAGGCGCC
CGGGAACACA ATCTTAAAAA CATAGACGTA GCCATTCCAC GCAATAAGTT GGTGGTGGTA
ACGGGCATCA GCGGCAGCGG CAAATCTTCG CTCGCATTCG ATACGATTTA TGCCGAAGGC
CAGCGCAGGT ACATGGAGAG CTTTTCGTCG TACGCCCGCG GTTTTATCGG CGAAATGGAA
CGCCCGGATG TCGACAAAAT CAGCGGCCTC TCGCCGGTGA TCAGCATTGA ACAGAAAACG
ACTTCACGCA ACCCGCGCTC CACGGTGGGC ACGGTGACCG AGATTTACGA CTTCCTGCGC
CTGCTCTACG CGCGTGCGGG CGAGGCGTAC TCGTATGTGA CGGGCCGGCG GATGATCAAG
CAGTCGCAAG ACCAGATCGT AAACCAGCTG ATGACGCAGT TTCTAGGCCA GAAAATCATT
CTGCTCGCAC CGGCGGTGAA AGGTCGTAAG GGACATTACC GCGAGCTGTT TGTCCAAATC
GCTCGGCTTG GTTATACCAA AGTGCGTGTG GACGGGGAGG TGCAGGACAT TACGCCCAAA
ATGCAGCTCG ATCGCTATAA GGTGCACGAT ATCGAAATTG TGATCGACCG CGTGATTCCC
AAAAAGGAGG AGGAAGATTC GCAGTCACGG TACCGGATGA GCCAGTCGGT GGCGACGGCC
ATTAAGCAGG GCAAGGGCGC ATTGATGGTG CTGGATGCGA AAGGCAACAC GCATTACTTT
TCCCAAAACC TGATGGACCC CGAATCGGGG ATCAGCTATG ACGATCCCGC GCCGAATGCG
TTTTCGTTCA ACTCACCGTA CGGCTGGTGC CCTACGTGCC AGGGATTAGG CATTATCGAG
GAAATTACCG AGGATTCGAT CATTCCGGAC AAGTCATTGA GCATCAGTCG CGGAGGTATT
GCACCAATGG GTGAATATCG TGAGGCGTGG ATATTCAAGC AGCTGGAAGT TCTTCTCAAA
AAATACAAAA TCACTCTTAC TACCCCGCTT GAAAAATTTC CCGAGGAGGC ACTGAAACTC
GTGCTTTATG GAAGCGAGGA AGCGGTTCCG GTGCCTTCGA AAAAATACCC CGGCACGGAA
TGGGAAACGA AATTCGACGG GATCATCAAC TTTTTGAAGC GCCAGCAGGA GTCGGGCAAC
GAAAAAATTC AGGATTGGCT GAAAGATTTC ATGGTAACCC AAACCTGCCC CGAATGTCAG
GGAAAACGCC TGCGAAAGGA ATCGCTGCAC TTCAAAATCG ATAAAAAAGA CATTGCCGAG
CTGGCCGACA GCGACATCCG CGTGCTGGCC GAATGGCTGG TAGGGCTGGA AGACCGCCTG
GAAGAAAAGC AGCGCGTGAT CGGTCACGAG GTTTTGAAAG AAATCCGCAA ACGCGTGGGC
TTTATGCTCG ACGTAGGCCT GGATTACCTC ACCTTAAACC GCTCGCTGAG GACATTGTCC
GGCGGCGAAG CACAGCGCAT CCGCCTCGCG ACGCAAATCG GTACACAGCT GACGGGCGTG
CTTTATATCA TGGATGAACC GAGTATCGGG CTGCACCAGC GCGACAATGT ACGCCTGATC
AACTCGCTCA AAAGCCTTCG CGACCTGGGT AACACGGTTC TGGTAGTGGA GCACGACAAG
GATATGATGC TCGCATCAGA CTACATTCTC GACATTGGCC CCGGAGCCGG GCGTCATGGC
GGGAGCGTGG TGGGGGCGGG TACACCGGAG AAATTCCTTG AAAATGGCTC ATTAACTGCG
GATTACCTGG CTGGTCGCGA AGCCATTCAG GTACCCAAAA AGCGCCGGAA AGGTAAAGGC
GAGTCCATCA CGCTGAAAGG CTGTACCGGA CATAACCTCA AAAATGTGTC GGTATCGATA
CCGCTTGGTA CGATGATCTG CGTGACGGGC GTGAGCGGCA GCGGTAAATC GTCGCTGATC
CACGAAACGC TGTTTCCATT GCTCAATCAG CATTTTTACA AGTCGAGAAG GGAGCCACTT
CCTTACAAAT CCATCGAAGG CCTCGAACAT ATTGATAAGG TCATCGAGGT GGACCAATCG
CCGATCGGCC GCACGCCGCG CTCGAACCCG GCTACTTACA CGAATCTGTT TACCGACATC
CGGACACTTT TTGCGGAATT GCCCGAGGCC AAAATCCGCG GTTACAAGCC GGGCCGCTTC
TCATTTAATG TCAAAGGCGG ACGGTGCGAG GATTGCGAGG GTGCAGGGAT GAAGAAGATC
GAAATGGACT TTTTGCCCGA TGTGCATGTC AATTGCGAAA CCTGTAAGGG AAAGCGGTTC
AACCGGGAGA CGCTCGAAGT TCGTTTCAAA GGCAAATCCA TCGCCGATGT GCTCGATATG
ACCGTCGAAT CTGCGTTGGA ATTCTTTGAA AACCAGCCGA GGTTACTGCG CAAAGTGCAG
ACACTGAACG ATGTAGGTTT GGGCTACATT ACCCTCGGCC AGCACGCCAC TACATTATCC
GGCGGCGAGG CGCAGCGTGT GAAGTTATCG GAAGAGCTAT CGAAACGCGA TACGGGCAAG
ACATTGTACA TTCTCGACGA GCCAACCACC GGTTTGCATT TTCAGGACAT CCGCCATTTG
CTCAATGTAT TGAACAAACT GGTTGAAAAA GGAAATACCG TCCTCATCAT CGAGCACAAC
CTCGACGTGA TCAAGGTCGC CGACCACGTG ATCGACGTCG GTCCGGAAGG CGGTGCGCAA
GGCGGCCGTA TCATCGCGGA AGGAACGCCC GAGAAAGTAG CCAAAGTGAA AGGCAGTTTT
ACGGGGTACT TCCTGAAAGA AGAATTGAAA TAG
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| Protein sequence | MEYLNGLEVA EQDLIEVQGA REHNLKNIDV AIPRNKLVVV TGISGSGKSS LAFDTIYAEG
QRRYMESFSS YARGFIGEME RPDVDKISGL SPVISIEQKT TSRNPRSTVG TVTEIYDFLR
LLYARAGEAY SYVTGRRMIK QSQDQIVNQL MTQFLGQKII LLAPAVKGRK GHYRELFVQI
ARLGYTKVRV DGEVQDITPK MQLDRYKVHD IEIVIDRVIP KKEEEDSQSR YRMSQSVATA
IKQGKGALMV LDAKGNTHYF SQNLMDPESG ISYDDPAPNA FSFNSPYGWC PTCQGLGIIE
EITEDSIIPD KSLSISRGGI APMGEYREAW IFKQLEVLLK KYKITLTTPL EKFPEEALKL
VLYGSEEAVP VPSKKYPGTE WETKFDGIIN FLKRQQESGN EKIQDWLKDF MVTQTCPECQ
GKRLRKESLH FKIDKKDIAE LADSDIRVLA EWLVGLEDRL EEKQRVIGHE VLKEIRKRVG
FMLDVGLDYL TLNRSLRTLS GGEAQRIRLA TQIGTQLTGV LYIMDEPSIG LHQRDNVRLI
NSLKSLRDLG NTVLVVEHDK DMMLASDYIL DIGPGAGRHG GSVVGAGTPE KFLENGSLTA
DYLAGREAIQ VPKKRRKGKG ESITLKGCTG HNLKNVSVSI PLGTMICVTG VSGSGKSSLI
HETLFPLLNQ HFYKSRREPL PYKSIEGLEH IDKVIEVDQS PIGRTPRSNP ATYTNLFTDI
RTLFAELPEA KIRGYKPGRF SFNVKGGRCE DCEGAGMKKI EMDFLPDVHV NCETCKGKRF
NRETLEVRFK GKSIADVLDM TVESALEFFE NQPRLLRKVQ TLNDVGLGYI TLGQHATTLS
GGEAQRVKLS EELSKRDTGK TLYILDEPTT GLHFQDIRHL LNVLNKLVEK GNTVLIIEHN
LDVIKVADHV IDVGPEGGAQ GGRIIAEGTP EKVAKVKGSF TGYFLKEELK
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